Ostrea edulis (European flat oyster): 125679677
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Entry
125679677 CDS
T09123
Name
(RefSeq) squamous cell carcinoma antigen recognized by T-cells 3-like
KO
K22611
squamous cell carcinoma antigen recognized by T-cells 3
Organism
oed
Ostrea edulis (European flat oyster)
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oed03041
]
125679677
03036 Chromosome and associated proteins [BR:
oed03036
]
125679677
Spliceosome [BR:
oed03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
125679677
Chromosome and associated proteins [BR:
oed03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
125679677
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
HAT_PRP39_N
Suf
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
Lsm_interact
HAT_Syf1_CNRKL1_C
LSM_int_assoc
RRM_occluded
UTP6_C
RRM_5
DUF5452
Motif
Other DBs
NCBI-GeneID:
125679677
NCBI-ProteinID:
XP_048775052
LinkDB
All DBs
Position
1:complement(78858365..78879814)
Genome browser
AA seq
959 aa
AA seq
DB search
MAESMEKEDTSKSIEEEDEGLAEETEDAEMESDKSDSSESGGESEDEEANKKRLEELQKQ
IEENPYFYDGHTEMMKILRNTGELEKLRETREKMSRFFPLTQELWLEWLRDEIPLATDES
ERKHVYDLFERAVKDYLSVDVWLEYVQFCIGGMGQIDGISHIRDVFERALSSAGIHVAAG
SSLWEAYREFENALMSGYMPQPGQVATPEQEEKFNAQQDRVVSLFKRQLSIPLMDMQETM
AEFKEYFEEEIDDGTKDAYNKALEKLEKLTPYEEALTAAESPRLDAYLSYIDYEMTHDDP
ARIHNLFERALQENCLNSELWLKYARYLDHKRLQVETLVLGMYERSVRNCPWCSQLWQRY
ILAMERFHKPQKEIKELVDRALQCGFNSGADYLVVWSTYCDYLRRRIKWDQDHEEDLELF
RITIESAVGFLSYYGVEADPKGSLQQLWAVIEGKFCKNMTRAREIWNDIMSAGRNHEATL
WLDYLKIERAYGDNKHCRKLLNRALNVVTDWPEGIVEAMINFEREEGNLEQYDAAVTKCE
IHMDAINKERKEAEREEKRQHRRLEKKQKRFDVKQKGKKGFENKDSKDEDRSSQRVIERK
PETKKRKSEDESGEFKVPGAPSSKGPPPPGFKEPLPPGSKGPPPPGFKGPPPPGYKGTEP
AAKKQKIDEENPNTGGKGDGPNSHSEFVEKAEQDPDKSKRTAFVSNLDYSIDEDRIGQLF
AKCGEMTDIRLVKSIRGKSKGYAYVEFKDELGMLEALKLDRTPVEGRPVFVSKCEDRSQK
KAQFKFSTELEKNKLFVKNLPFTCSKDALFQIFSEHGRVREIRMVTYRSGAPKGLAYVEY
EDEHDAQKAVVKTDGLKIGEHEIEVAISNPPQRGTPLSTREDTSFTLALGGGKKETESRG
KARTQLSLVPRSIQRTPAKSARPTSTPPPPTETNGQSTASTTTTTKMSNDDFRKMLLKK
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaagcatggaaaaagaggatacctcaaaaagcattgaagaggaagacgaaggt
ctagcagaagagacagaagatgcagaaatggaatccgacaaatctgattccagtgaatct
ggaggagagagtgaggatgaggaggcaaacaagaagaggcttgaggagcttcagaagcag
atagaggaaaatccgtacttttatgatggacatacggaaatgatgaagattcttcgtaac
actggagaactagaaaaactgagggaaactagagaaaaaatgagccggttctttcctctc
acacaagaactttggttggagtggctcagagatgagattcctttagcaacagatgaaagt
gagagaaaacatgtatatgacctgtttgagagagctgtgaaagactatttatctgtagat
gtgtggctggaatatgtccagttctgtatcgggggaatgggacagattgatggaatttcc
cacatcagagatgtctttgagcgtgctttgtcgtcagctggcattcacgtcgcagcagga
tctagtctgtgggaggcctacagggaatttgaaaatgctttgatgagtggttatatgcca
caacctggacaagtagccaccccagagcaggaagaaaaattcaatgcgcagcaagacaga
gtggtctcccttttcaaaagacagttatctatccccttgatggatatgcaggagactatg
gctgagtttaaggaatacttcgaggaggagattgatgatggaactaaagatgcttataat
aaagcccttgaaaaactggagaagttgacaccgtatgaagaagctttgacggctgcagag
tcgccacggttggatgcatatctgtcctacattgattatgagatgacccatgatgatcca
gcccgaattcataacctatttgaaagagcattacaagaaaactgcttaaactcagaactg
tggctgaagtatgctagatatttggatcataaaagactacaggtggaaaccttggtcctt
gggatgtatgaaagatcagtcagaaactgcccatggtgttctcagttatggcagcggtac
atattagctatggagagattccacaaaccacagaaggaaatcaaagaattggtagaccgg
gcgttacagtgtggatttaattcgggtgccgactacctggttgtgtggagtacgtactgt
gactatctgcgacggagaatcaaatgggatcaggaccatgaagaggacctggaattattc
agaataacaattgagagtgctgttggatttttatcatattatggtgtcgaggcagaccca
aagggcagcttacaacagttgtgggctgttatagagggcaagttttgtaaaaatatgact
agagcaagagaaatctggaatgacatcatgtcggcaggaagaaatcacgaggcaacccta
tggttagattatctcaaaatagaaagggcatatggtgataacaaacactgccgaaaactt
cttaaccgagcgctgaatgtggtcacagattggcctgaaggaattgtggaagccatgatc
aacttcgaaagagaggaaggaaatttagaacagtatgatgcagcagttactaagtgtgag
atacatatggatgcaatcaacaaagaaagaaaagaggctgaaagggaggaaaaaagacaa
cacagaaggctagagaagaaacagaaaaggtttgatgtaaaacagaaaggaaagaaagga
tttgagaacaaagacagtaaagatgaggacagatcttcacaaagggtcatcgaaaggaag
ccagagaccaagaaaaggaagtcagaagatgagtcaggtgaattcaaagtaccaggagcg
ccaagctcaaagggaccacccccacctggtttcaaggagcctctccctccaggatctaag
ggaccacctccacctggatttaaaggaccacctccacctggatataaagggacagaacct
gcagcgaagaagcaaaaaattgatgaagaaaatcccaacactggtggtaaaggggatggg
cctaactcgcattcagagtttgtagagaaggctgagcaagatccagataagtccaagcga
acagcctttgtcagcaatctggattactccatagatgaagatagaattggacaattattt
gctaagtgtggagaaatgacggacattcggctagtgaaaagtatcagagggaaatcgaaa
ggatatgcgtatgtagaattcaaagacgagctgggtatgctggaagctttgaagttggac
agaacacccgttgagggcagaccagtttttgtctccaaatgtgaagacaggagtcagaaa
aaggctcaatttaagttttctactgaattggagaagaacaaattgtttgtgaagaatctt
ccatttacctgctcaaaggatgctctgttccaaatcttcagtgagcatgggcgtgtacga
gagatcagaatggtcacatacagaagtggagcccccaaaggcttagcctatgtagagtat
gaggatgagcatgatgcacaaaaagcagtggtcaagacagatggtttgaagattggtgaa
cacgaaattgaggtggccatcagtaaccctccacagagaggtacccccctcagcaccagg
gaggacacttccttcacactggcactgggtggaggaaagaaagagaccgaatcgagagga
aaggctcgtacacagttgtccttagtgccaaggtcaatccagcgaacacctgccaaaagt
gccagacccacatctacacccccgccacccacagagactaatggacagtcaacagccagc
actacaactactaccaaaatgagcaatgacgattttagaaaaatgctgcttaaaaaatga
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