Ostrea edulis (European flat oyster): 125680284
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Entry
125680284 CDS
T09123
Name
(RefSeq) transcription factor SPT20 homolog isoform X1
KO
K21245
transcription factor SPT20 homolog
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
125680284
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oed03036
]
125680284
Chromosome and associated proteins [BR:
oed03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
125680284
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt20_SEP
Motif
Other DBs
NCBI-GeneID:
125680284
NCBI-ProteinID:
XP_056012517
LinkDB
All DBs
Position
2:26821790..26862553
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AA seq
920 aa
AA seq
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MEKITRAVEYAEYLVQTAKQRPESLCRPSSSNKPKSIHQKLQELYIESCQNQDHSKDIVL
SSNLLSKLVRRDKLNCLVLKLYPGNEGYSIMLRGRGGVELETLKLPYEVSELLDFVDSSE
LPPFLVDLLEKAQMNVFYSGCVILEVRDYRRSITGSYDTQYVLLKPTPQSLLSDMYNIIN
DGHRWTQEDQFALESQLLLATEEPLCLDPSPSVFLVNNKLQYEQKSLSNPMLKRSARRYN
QAALNRKRKLASAAAPKELKLHDFIHKKKPKSNPPVNLRVGKPHVDMWKQKPLQLSAPES
VEVAKFATVIPASDPGSDNSFETVEEITLERDVSTEKKILAKLTIQKRKSEDEFYGELYL
DHDYREGSVGTSCTFLLGTRILVDKYLEQFKEIFTEEGRRAVKITTQKPGQPPNVEYTQT
SQTPTTPGIGPAGPQGILSAHAPALTAAIKGQFTQADLSTTSSSGLTAKRNVPIQLSLTL
APVAQGAQPTANQLQLNIQKSQPQQVGLRGKPLSQVAGQRVSSSTPSPATTPTSVPIQGQ
LFSPSLVPSPVSSQNSKGMTSLSSPPVSVPSRKSSTEGTTVQQINQGIPQGNITFVQNTD
CSSSTQSGQQQNIANINITNIGLPPNINIQNLSGLPGVNIANLQSLQNMQVSLTGVSMPG
GGIAVPVPISLINTNSGVIQNQNVFVSSLPSGSLSSTTTGSVPVSVSRKLTSSSVGSAPT
LVTMVTSMPTTITTSSVTSSSSSSLSSPGVVTSESASNPSTVITASGGLLSPIIGLAPFV
QGGVKSQAGSSIRQPSSVPLLQIQGQSGIQLVGLPQQRAPGKSGSGVMTSQSGGKPVSTL
PTTVQLTAQNISGHQLATLSQFKPNTPQGGAVPQQQLLQLQHLPYKQLQQIQIRQPQVAT
STSASKSKNKKRTTPTPPKQ
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atggagaagataaccagagctgtggaatatgcagagtaccttgtccagacagctaaacag
agacctgaatcactgtgtcgaccatcatccagcaacaagcccaagtcgatccaccagaaa
ttgcaggagttgtacatcgaatcctgtcagaaccaggaccacagtaaggatattgtgctg
tcgtctaacctattgtctaagctggtgaggagggacaaattgaactgtttggtcctgaag
ctgtaccctgggaatgagggctactccatcatgttaagggggaggggaggggtagagctg
gagacgctgaaactcccatatgaggtgtcagagttgctggactttgttgattcttcagag
cttcctcctttccttgttgatctactggagaaagctcagatgaatgttttctacagcggc
tgtgtcattctagaggtcagggattaccgtcgctccatcactggttcctacgacactcag
tacgtgcttctgaagcccactccccagtcccttctatcagacatgtacaacatcataaat
gacggacatcgctggacacaagaggatcagtttgcactggagagtcagttgctattggca
acagaggagcccctgtgtcttgacccctctccctctgtttttctggtcaacaacaaactc
cagtacgaacagaagagtctcagtaaccccatgctcaaacggtcagcaaggcgttacaac
caggctgctctaaacaggaagaggaaattggccagtgcagccgcaccaaaggaactgaag
ctgcacgacttcattcataaaaagaagccaaaatcaaatcctccagtcaacctccgagtt
ggaaaaccgcatgtggacatgtggaaacagaaaccgctccagttgtctgcccctgaatcg
gtggaggtggccaagtttgcgacagttataccagcttcagacccagggtctgataactca
tttgaaactgttgaagagatcacattagaacgggatgtgagcacagagaagaaaattctg
gccaaactgaccatccagaaacggaaatcggaggatgagttttacggagagctatatctg
gaccatgactaccgggagggcagtgttggcacctcctgcacgtttttattgggtacaaga
attctggtcgacaaataccttgagcagtttaaggagatatttactgaggaaggacgaagg
gcagtgaagattacgacacagaaacctggacagcccccgaacgtagagtacacccagacc
tcccaaactcccaccactcccgggattgggccagcgggaccccaggggattctcagtgca
catgccccagctctgactgccgcaatcaagggacagtttacacaggctgatctgtccacc
acttcctcctcgggactgaccgccaagagaaatgtcccaattcagctctctcttaccttg
gctcctgtggctcaaggtgcccaacccactgcaaaccagctgcagctgaacatccagaaa
tctcagccacagcaggtgggactgagagggaagccattgtcacaagtcgcagggcaaagg
gtatcctcttccactccaagtccagccactacacccacatctgtcccaattcagggacag
ttattttctccgagtctggttccctcccccgtttcatcacagaacagtaaaggaatgacc
agtttatcctcgcctccagttagtgttcctagcaggaagtcatcaacagagggcaccact
gtgcagcagatcaatcaggggatcccacagggaaatatcacatttgtacagaacacagat
tgtagttccagcacccagagtggtcaacaacaaaacatagcgaacatcaacatcaccaac
attggactgccccccaacatcaacatccagaacctgagtggacttccaggggtcaacatc
gccaacctccagagtctgcagaacatgcaggtgtccctgaccggagtctccatgcctggg
ggcgggatagctgtccctgtccccatcagcctcatcaacaccaactcaggtgtgatacag
aaccagaacgtctttgtcagctctctccccagtggttcgctatcctccaccaccactgga
tccgtgccagtctctgtgagtagaaaacttacttcgtcttcagttggttctgcaccaact
ctggtaaccatggtgacatcaatgccaacaaccatcacaacttcatcagtcacatcatca
tcgtcatcatcattgtcatcgcctggcgttgttacatcagagtctgcttctaaccctagt
acggttattactgcctcaggaggattgttatctccaatcattggattagctccctttgta
cagggaggggttaaatctcaagcagggtccagcatcagacagccctcatctgttcctctc
ctacagatccagggacagtccggtatacagttggtggggcttcctcaacagagggcgcca
ggaaagtcagggtcaggggtcatgacctctcagtctggaggtaaaccagtatcaaccctt
cctacaacagtgcagctgacagcgcagaacatttcaggacaccagttagctaccctgtct
cagttcaaacctaacacaccacaagggggcgctgtaccacagcaacagttgctacagtta
caacatcttccatataaacaactacagcagatccaaatccgtcagccacaggtcgccacc
tccacatccgccagtaaatcaaagaataagaaacggaccacgcccaccccacctaaacag
tga
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