Ostrea edulis (European flat oyster): 125680417
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Entry
125680417 CDS
T09123
Name
(RefSeq) cyclic nucleotide-gated channel rod photoreceptor subunit alpha-like
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
oed
Ostrea edulis (European flat oyster)
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oed04040
]
125680417
Ion channels [BR:
oed04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
125680417
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
CLZ
FliG_C
LTXXQ
DUF1359
GBP_C
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
125680417
NCBI-ProteinID:
XP_048775959
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All DBs
Position
2:complement(5016615..5024445)
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AA seq
670 aa
AA seq
DB search
MCVLSFQQGTVKKFKATLEEDSFIRRFTVTDRGEIDDIEHEFNEIFTIEFWRTLVINPAN
PPFYWWSCVVTCAVMYNLVFVILRGCFWHKLQTPDVVACWYFPDYFCDVIYIMDMFMKSR
VGFLEQGLLCRDIKRLAMVYIKSWMFVVDVICIAPLDFLYLVVGFNAFLRINKCLKVWRM
REFFNLAATHANNPNLFRVVNLILIIIVIIHWNGCLYFAISRTLGFGSDEWVYPDIYRHD
YSSFWKQYAYCFYWSTLTLTTIGDTAYPIHTAAYIYCTTCSLVGVLIFATIFGNVGALIN
EMDAARNDFQHKVDAVKRYMVNRQVYGPVQERVINWFDYTWNNKESVDDSKHLDYLPEKL
RAEICIHVHLKTLRKVEIFKDCEPGVLVELVLKLKLQVFSPGDYICRKGDIGRDMYIVKR
GKLQVCSEDGKVIFVTLSDGAVFGEISVLNIPGNKTGNRRTASVRSVGYSDLFSLSKNDL
MEALREFPEARMSLLEKGKKMLKKDKLFDEELARRQERLEQKLDRKIEMMSDAVEDLQKV
VKILIEKLSSNEVPQKPKSSSNEVAHKPQPPDDDDDDDDEESIWKTPSSSIYSITLKESL
HGDKVPEQRKSVTENELERPSSARTDRKLSKQYSRESDIDQVEDEKSDVDLKEDDSKTSV
LDILVNSDEF
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgttttatcatttcagcaaggaactgtcaaaaaattcaaagcaactcttgaagag
gattccttcattcggaggttcaccgtcacagatcgtggagaaatcgatgacatcgaacat
gaattcaatgaaatatttaccatagagttttggaggacactggtaatcaaccccgccaat
ccccctttctactggtggtcctgcgtggtcacgtgtgctgtgatgtacaacctcgtcttc
gttatactacggggctgtttctggcacaaacttcagacgccagacgtagtcgcctgctgg
tatttcccagactacttctgtgacgtcatctacattatggacatgttcatgaaaagtaga
gtaggcttcctagagcagggtttattatgccgtgacataaagaggctggcgatggtttac
atcaaatcctggatgttcgttgtggatgttatttgcattgccccactagatttcctttat
ttggttgtaggttttaatgcctttcttagaatcaataagtgtctgaaagtatggagaatg
agagagtttttcaacctggcggcgactcatgccaacaaccctaatctctttcgtgtggtc
aacctcatccttatcatcattgtgatcattcactggaacggttgcctgtactttgccata
agccggactctgggcttcggctctgatgagtgggtgtaccccgatatctaccgacacgat
tactccagtttctggaaacagtacgcctactgtttctattggtccacgctaacgttgacg
accattggggataccgcctacccaattcatactgcggcctacatttactgcacgacctgt
agcttggtgggagttttgattttcgctaccatttttggtaatgttggagctttgatcaac
gagatggatgccgctaggaatgattttcagcacaaggtggacgctgtaaagcgatacatg
gtgaaccgacaagtgtatggaccagtacaggaaagagtgatcaattggttcgactataca
tggaacaataaggaatcggtggacgactccaaacatttggattacttgcctgaaaaacta
cgagcagaaatctgtatacatgtacatctgaaaactctaagaaaagttgaaatattcaaa
gattgtgaaccaggggtattggtagaattggtactgaaactcaaactacaagtgtttagt
cccggcgattacatctgtagaaagggtgacatcggtagagatatgtatatcgtaaagaga
ggaaagctccaggtgtgttctgaggacggtaaggtcatctttgtaacactatctgacgga
gcggtgtttggagagatcagcgtcctcaacattcctggaaacaaaacgggaaacaggcga
acagcgagtgtccggagcgtgggctactccgatctcttctctttgagcaagaatgatcta
atggaagctcttagggagtttcccgaggccagaatgagtctgcttgagaaggggaagaaa
atgttgaaaaaagataaactatttgatgaagaattagcaagacgacaggaaaggttggag
caaaaattggacaggaagatcgaaatgatgtctgatgccgtggaagacctgcagaaggtc
gtcaaaatactgatagaaaaattatcatcgaacgaggtaccacaaaaaccaaaatcatca
tctaatgaggtagcacacaaaccacagccgcccgatgatgatgatgatgatgatgatgaa
gaatcaatatggaagacaccttcaagttcaatttactctattacattgaaagagtccctc
catggagacaaggttccggaacaaagaaaatctgtgacggagaacgaactggaaagaccg
tcctctgctagaacggatagaaagttatctaaacagtattctagggagagtgatattgat
caggttgaagatgaaaagagtgacgtcgatttgaaggaggacgacagtaagactagtgtg
ttggacatcttagtgaatagtgatgagttttga
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