Ostrea edulis (European flat oyster): 125680442
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Entry
125680442 CDS
T09123
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35 isoform X1
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
oed
Ostrea edulis (European flat oyster)
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oed03041
]
125680442
Enzymes [BR:
oed01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
125680442
Spliceosome [BR:
oed03041
]
Complex C
Other components
Complex C specific factors
125680442
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
DEAD
AAA_22
ABC_tran
Cas3-like_C_2
nSTAND3
AAA_7
Motif
Other DBs
NCBI-GeneID:
125680442
NCBI-ProteinID:
XP_048776002
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All DBs
Position
1:complement(77423476..77561830)
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AA seq
701 aa
AA seq
DB search
MSSFAPKFWKPGAEAPGQALKEERTTIAEEGGTTVVYNQNVSLSLEQQRQKLPVFKLRNH
ILYLVEKYQTVVIVGETGCGKSTQIPQYLLEAGWGAEGHLIGVTQPRRVAAVTVATRVAE
ERGALLGDEVGYTIRFDDTSDPTRTRIKFLTDGLMIREIMEDPLLKKYSVVMLDEAHERS
LNTDLIMGLLRKIQKKREDLKLIVASATLDAEEMKDFFNSNSSGNPDKDTAAILSVEGRN
FPVDIHYTIDPVPDYIKATVETITKIHHQEKEGNILAFLTGQDEVETVTRQLIEVAKECI
RTQAAMKMKVLPMYGSLPASEQMKVFERCGRTTRKIVVATNIAETSITIPGIVYIVDCGF
VKLKAYNPKSGVESLVTIPVSKASAEQRAGRAGRVRAGKAYRLFTEDGYGGLEASTVPEM
QRSDLAPVILQMKALGVSNIVRFNFLSPPPAQNMIRGLELLYALQALDNNGNLTSPLGLQ
MAEFPLPPMFSKMLLMSGEFQCSEEAVIIAAMTQIQNVFITPLGEKFAANRAKRNFSVEE
GDHVSLLNVFRTFIKYKKNSKWCKENFLNYKGLCRAIEIQQQLHRLLRKFQVPLISCQEN
VDLVRRCITSGFFANAAYLHYTGTYRTVRDDHEIHIHPTSVLTFTDPPKWVVFNDVVQTN
RDYMRDITVIEPDWLSELAPHFYQFGTEREIAAKRARTDDD
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcgtttgcaccaaagttttggaagcctggtgctgaagctccgggccaggctttg
aaggaggagaggactacaattgctgaggaaggggggactactgtggtgtacaatcaaaat
gtatccctgtctcttgagcaacagcgacaaaaacttccagtgtttaagctgaggaatcat
atcctgtatttggtggagaagtaccagacagtggtaattgttggagagacaggatgtgga
aaatctactcagatacctcagtatttactggaggctggatggggagcagaaggtcacttg
attggggtcactcagccgcgacgagtggctgctgtcactgttgccacacgagttgcagag
gaaagaggggctcttttaggggatgaagtgggatacacaatcagatttgacgacacgtca
gatcctacacgcactcgaatcaaatttttgacagatggtttgatgattagagaaattatg
gaggacccgctcttgaagaagtacagtgttgttatgttggatgaggcacatgaaagatca
ctaaacacagatttgataatggggcttctacgaaagattcagaaaaaaagagaggatctc
aagctgattgttgcgtcagccacactggatgcggaggaaatgaaagacttctttaatagc
aactcatcagggaatccagacaaagacactgctgccatattgagtgtggaaggtagaaat
tttcctgtggatatccattacactattgacccagttcctgattacattaaggctacagta
gagaccatcactaaaattcaccatcaggaaaaggagggaaacattctggcttttctaacg
ggacaggatgaagttgaaactgtgacaagacaattaatagaagtggccaaggagtgcata
aggacccaagctgccatgaaaatgaaggttttaccaatgtatggtagtctacctgcttca
gagcagatgaaggtgtttgagagatgtggaaggacgacaaggaagattgttgtggctaca
aacatagcagagacctcgatcaccatcccaggcattgtgtatattgtagattgtggattt
gtgaagttgaaggcatataatccaaaatcaggagttgaatctctggtgaccattcctgtc
tccaaggcctcagcagaacaaagggctgggagggcaggaagagtgagggcaggaaaggca
tacagactgttcacagaggatggttatggtggacttgaagcatcaactgtcccagaaatg
cagcggtcagacctcgcccctgtgatccttcagatgaaggctctaggagtgtccaacatc
gtcagattcaacttcttatcgcctcctcctgcgcagaacatgattagaggcctggaatta
ctctacgcacttcaagctttggataacaatggcaacctaacgtcaccactagggctgcaa
atggcagaattccccctaccgcccatgttctccaagatgctgctcatgtcaggtgaattt
cagtgctctgaagaggcggtgataattgcagccatgacacagatacagaatgtgtttata
acgccacttggagagaaattcgcagctaatcgtgccaagagaaatttttctgttgaggaa
ggtgaccatgttagtttactaaatgtgtttcgcacttttatcaagtataagaagaattcc
aagtggtgcaaagaaaattttctgaactacaaaggcctctgtcgtgcaattgaaatacag
cagcaactacatcgtctacttagaaagttccaggttccattaatatcatgtcaagaaaat
gtagacctggtcagacgttgtataacctctggattctttgctaatgctgcctacctccac
tacacaggaacttacagaactgtcagagatgaccacgaaattcacatccatcctacatcc
gtactcacttttacagatccaccaaaatgggtggtatttaatgatgttgtccagactaac
agagactacatgagggacatcacagtcattgaaccagactggttgtctgaattggctccc
cacttctaccaatttggaactgagagagaaatagctgcgaaacgagctagaactgatgat
gactga
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