KEGG   Ostrea edulis (European flat oyster): 125680554
Entry
125680554         CDS       T09123                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A-like
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
oed  Ostrea edulis (European flat oyster)
Pathway
oed03030  DNA replication
oed03410  Base excision repair
oed03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:oed00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    125680554
   03410 Base excision repair
    125680554
   03420 Nucleotide excision repair
    125680554
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:oed03032]
    125680554
   03400 DNA repair and recombination proteins [BR:oed03400]
    125680554
Enzymes [BR:oed01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     125680554
DNA replication proteins [BR:oed03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    125680554
DNA repair and recombination proteins [BR:oed03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      125680554
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 zf_DPOE_2 zf-DPOE DNA_pol_B DNA_pol_B_exo2 RNase_H_2
Other DBs
NCBI-GeneID: 125680554
NCBI-ProteinID: XP_048776193
LinkDB
Position
2:complement(81776229..81893917)
AA seq 2274 aa
MVLQNSGKYTRPKADNDSDNTGRDEGSDRRLQRAVAGDAVDSKFGFDRYKDAKERTGWLI
NMHPADILDENKQLISAVDYYFLEEDGSRFKATLPFKPYFFVATKPGCEREVASYLTKKF
SGKLATVETVYKEDLDLPNHLVGLKRQYLKLSFLSVDELTKVRREIHPAVRKNKEREQSS
EAYTTLLSNHLLGTDVDSSENKASNQMENIIDIREYDVPYHVRVSIDLKIFVGHWYTVRG
RGSLPVEIRHREDLVDRPDPVVLAFDIETTKLPLKFPDSQTDQIIMISYMIDGQGFLICN
REIVAQDVEDFEYTPRPEFEGLFTVFNEPDEECLLRRFFDHVLEVKPQIFVTYNGDNFDW
PFVETRAAIHAMDMSQEIGFQKDNQGEYKSRPAVHMDCLRWVKRDSYLPVGSQNLKAVAK
AKLRYNPVELDPEEMCRMASEEPQVLSNYSVSDAVATYYLYMKYVHPFIFALCTIIPMEP
DEVLRKGSGTLCEALLMVQAYHANIVFPNKQEAVWNKLTDDGHVLDSETYVGGHVEALES
GVFRADIPCRFRMVPEAFQNLIDKVEKTMKHAIEVEEKIPLEEVTNFDEVCADVVESLSM
LRDCPNRLENPIIYHLDVGAMYPNIILTNRLQPPAIVDESTCAACDFNKPGATCQRKMPW
MWRGEYMPASKNEFHRIQQQLENEKFPPAFPGGPPRAYHQLTKEEQATAEKKRLSDYCRK
AYKKVHSTRMEERTATICQRENSFYVDTVRAFRDRRYEFKGLNKVWGKKLAEAKKSGDAA
EIKKANGMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVCYTGAHIITKAREI
VEQIGRPLELDTDGIWCVLPATFPENYVVKSTNAKKPKVTVSYPGAMLNIMVKDLFTNDQ
YQELEDARALKYSVRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFNFDGSLAELK
GFEVKRRGELELIKIFQSSVFEAFLKGVALDECYAAVAKVADYWLDVLFSKAENMPDSEL
FELIAEKRNMSRTLAEYGEQKSTSISTAKRLAEFLGDQMVKDAGLNCHYVISKKPEGSPV
TERAIPLAIFQAEPSVTKHYLRKWLKSPSLSDFGIREILDWEYYIERLGSCVQKIITIPA
ALQQVANPVPRVPHPPWLHKKLMERNDIFKQKKISEIFAPAQRKKTEEISSEKELFSQED
EANHTVSDMEDMMNFKKPANGMVVSHKRKRDRSSIGDVEASQDSQGSQTWREILGPPPSM
GTTKEERRTWLEYHKKKWQLQAKDRTERKRRRVEFGDVTTGAYLGGNRSGLSGFLRRTAR
SIMDMPWQIVQLMETGHPGQFKLWALIGNDLHAMKVNVPRIFYVNQKTPKDGEGAMWKKV
MKTLPRSHPVMYLYEYSVPEDVYQEHINEISADLSSPDIEGVYETQVPLLFRALCRLGCI
TTVNRDFAKYMQGRETDTFDLDHLNFRTLAQFSYLEPGSMKHIYLYHHACGSKMVFGVFF
PMSKRAVVYIVDTVRSDQMPTLTALYNAERNSKLTKLDENDLPPASHTFEYKLEKDVRQV
YRSIQRSLSAYKDEKRGPTYIAIQSPQDFQHLTSSMPGLNDFPLVPIHAADSDHMYNVLD
WQRVGCRRMIQHYLNVKFILQSMTEQCRYLHIPLGNFPTDITMFGCDLFFARHLHKHNHV
LWCSSSERPDLGGKEADDNRLCMELEESSNVEVNNPGACPTVCVELEISSLAVNTIIKSA
HVNDQEGASAVSFDTLPQSSLEEMVQGQGAATYLASYDETALCSTSFRILKTMVQGWVRD
VTLYNNIFADNQIIHFYRWLQSSTALLYDPALRRTLHNMMKKVFLQLISEFKRLGSNIVY
GNFNHLILCTKKRRLVDALGYVEYITNSIKSKDLFQIVEITYEQCWEYLVWLDPANHGGV
KGRLPSETPLEQTQPDPEKEGDSEEEGEEREETEILNKSENEDEPEIEMNWNIMQFLPEA
GACQTNFNLIVAGYILSVYNQLQEEQKILTPGSTPVKRRHNSQSQRVVETTTTTPQSVTF
AQDLVAGDLAQQMFLITQKIHKKFGHVNDMSGEFPNRPGSHLALQNPALEFVKCVCKVLS
LDSNINLQVMKLKRDLLKLIGVGEFAEEAVFTDPCLSYILPEVICKSCNHIRDLDLCRDP
YLSQDRLDSSWACVRCKAPYDMDEIEDTLLDAVHRKSMAFTLQDLKCVKCNGVKENNMRK
YCRCAGDFTNTMSSGDLAKTLMTFKGIARHYNMVLLMETVEWILKMNPKMTSDN
NT seq 6825 nt   +upstreamnt  +downstreamnt
atggtattgcagaacagtggaaagtatactagaccaaaagcggataatgattcagacaat
acaggacgtgatgaaggatcagatagaagattacagcgggccgtggctggtgatgcggtg
gacagcaagtttggatttgacagatacaaggatgcgaaggagagaacaggatggctcatc
aacatgcacccagcagacattttggatgaaaataagcagttgataagtgcagtggattac
tattttctggaggaagatggttctcgtttcaaggcaactttaccgttcaagccatatttc
tttgtggcaacaaagcctggctgtgagagagaggtagcatcctatttgaccaagaagttc
tcgggaaaattggccaccgtagagacagtgtacaaagaagatttagatttgccaaatcat
ttggtgggactaaagagacaatacctcaagctgtcctttctatcagtagatgaactcaca
aaagtgaggcgtgaaattcacccagctgttcgtaagaacaaagagcgagaacagtccagt
gaggcttacactacacttctcagcaaccacctacttggaacagatgtggacagttctgaa
aacaaagcttccaatcagatggaaaacattattgatataagggaatatgatgttccttac
catgtgcgtgtgtccatcgacttgaagatttttgtaggacactggtacaccgtgagggga
cgtggctcacttcctgtagaaattcggcatcgggaggatctcgtggatagacctgatcct
gttgttctagccttcgacattgagactacaaaattaccgctgaaattccccgactcccaa
actgaccaaattattatgatatcatacatgatagatggacagggtttcctgatttgtaac
agagaaatcgtggcccaggacgtggaagactttgaatacactccgcgtccggaatttgag
gggcttttcaccgtgttcaatgaacctgatgaggaatgtttgcttcgaagattttttgac
cacgtcttggaagtgaagccacagattttcgtaacttacaatggagacaactttgattgg
ccatttgtggagacaagagctgctattcatgctatggacatgtcacaggagatcggtttc
cagaaagataaccaaggagaatacaagtctcggccggctgtccacatggattgtttaaga
tgggtgaagagagatagttacttgccggttgggagtcagaatctgaaggctgtagcaaag
gcaaagttgaggtataaccccgtggaactggaccctgaggagatgtgtagaatggccagc
gaagaacctcaggttttatcaaactactctgtgtcggatgctgtggcgacctattacctg
tacatgaagtatgttcatccttttatttttgctttgtgcaccatcattcccatggagcca
gatgaggttctgaggaaaggttctggaactctatgtgaagctttgttaatggtacaggca
taccacgccaacattgtgttcccaaataaacaggaggcagtctggaataagctgacggac
gacggccacgttttggactcggagacctatgttggtggtcatgtagaagccctggaatct
ggagtcttcagggcagatattccatgtagatttagaatggtacccgaagcatttcagaat
ttaattgacaaagtggagaaaacgatgaaacatgcaatagaggtggaggagaaaatcccg
ctggaggaggtgacaaactttgatgaagtgtgtgcggacgtagtggagagtttgtccatg
ctgagggactgccccaacagacttgagaatcccatcatttatcacttggacgtaggggcc
atgtaccccaacatcattctcaccaacagattgcagccaccagccattgtagacgagagc
acctgtgcagcctgtgattttaacaaacccggggctacttgtcagaggaaaatgccctgg
atgtggagaggagaatacatgccagcatccaaaaatgaattccacagaattcagcagcag
cttgagaacgagaaatttcctccagctttccccggagggccaccacgagcttatcaccag
cttaccaaagaggagcaagcaaccgcagagaaaaaaagactctcagattactgtaggaaa
gcgtacaagaaagtgcactctacgcggatggaggaacgaacggctactatctgtcagaga
gaaaactcgttttatgtggacactgtccgagcatttagggatcggcgatatgaatttaaa
ggtctgaataaagtgtggggtaagaagttggcagaggccaagaagtcgggagatgcagca
gagattaagaaggccaatggtatggttgtcctctacgactcgctacagctggctcacaag
tgtatcctcaactccttttatggatatgtcatgagaaagggggctagatggtacagcatg
gagatggcaggagttgtctgctacacaggagcccacatcatcaccaaggccagggaaatt
gtggagcaaataggccgcccattagagttggacacagatggcatttggtgtgttttgcca
gccacatttccagagaactatgtggtgaaatcgactaatgcaaagaaacccaaagtgacc
gtgtcttatccaggagccatgctcaacatcatggtcaaggatctgttcactaacgaccaa
taccaggagctggaagatgccagagcactgaaatactcagtgcgcagtgaaaactccatc
ttctttgaggtagatggtccatatcttgctatgattttgcctgcttcgaaggaagaggga
aagaaactgaagaagagatatgctgtgttcaattttgatggatcactagcggagctgaag
gggtttgaggtgaagagaagaggggagttggagctgatcaagattttccagtcctcggtg
tttgaagcatttctgaagggagttgcattggatgaatgctatgcagctgttgctaaagtg
gcagactattggttagatgtactctttagcaaggcagaaaacatgccagattctgaatta
tttgagttgattgcggagaagagaaacatgtctagaactttagcagagtatggtgagcag
aaatcgacatcaatcagcacagctaaacgtctggctgagtttctgggtgaccagatggtg
aaggatgctggtttgaactgtcattatgtgatttccaagaaaccggagggatccccagtc
acggagagggcgattccgttagccatcttccaggcagaacccagtgtcaccaaacattat
ctcaggaagtggctaaagagcccaagcctgtcggattttggaattcgagagatattagac
tgggaatactacatagaaagattgggaagctgtgttcagaaaattatcaccattccagct
gccctacaacaggtggcaaatccagttcccagggtgcctcatccaccatggcttcacaag
aagttaatggagaggaatgacatctttaaacagaagaagattagtgaaatctttgcacca
gctcaaagaaagaagacagaagagatttcctcagagaaagagctgttttcacaagaggat
gaggcaaaccacacagtgtccgatatggaggacatgatgaattttaagaaacctgcaaat
ggaatggtggttagtcacaagaggaagagagatcggtcgagtatcggagatgtggaggcc
agccaagattcccaaggctcacaaacgtggagggaaatactaggaccacctccttctatg
ggaaccacgaaggaagagagacggacttggttggagtatcacaagaagaaatggcaactt
caagccaaggatagaactgagaggaagcggaggcgtgtggaattcggagacgttacaacg
ggggcctacctgggagggaacagatctggtctgagtggcttcctccgcaggacggctcgc
agtatcatggacatgccctggcagatcgtacagctgatggagactggacaccctgggcag
ttcaaactgtgggctctgattggaaatgatttgcatgccatgaaagtcaatgtacccagg
atattttatgtgaatcagaaaactccaaaggatggagagggtgcaatgtggaaaaaggtg
atgaagacgctacctcgctcccatcctgtgatgtacctgtacgagtactcggtccccgag
gatgtctatcaggaacatatcaatgagataagtgccgatttatcctctcctgacattgag
ggcgtgtacgagacccaggttccactgttgttccgtgccctatgtagactagggtgtatc
accacagttaatcgtgactttgctaagtacatgcagggacgagaaacggacacctttgac
ttagatcacctgaacttccgaactctggcacagttttcctacttggagccaggctccatg
aagcatatatatttatatcaccatgcatgtggaagtaaaatggtgtttggagttttcttc
cccatgtcgaagcgggctgttgtttacatagtggacactgtaagaagtgaccagatgcca
accctgacagctttgtacaatgcggagagaaattccaaattgaccaagctggatgagaat
gaccttccccctgctagccacacctttgaatacaaactggaaaaggatgtccgtcaagtg
tataggtcaatccagaggtcactgtctgcctacaaggatgagaagcgggggcccacatat
atagccatccagtcaccccaagatttccagcatctgacatcctctatgcctggcctgaat
gattttccacttgtacctatccatgcagcagacagtgatcacatgtataatgtgctggac
tggcaaagagtgggatgtagacgcatgattcaacactatctcaatgtcaagttcatcctg
cagtccatgactgagcagtgtcgctacttgcacatccctctaggcaacttcccgacagac
atcaccatgtttggctgtgaccttttctttgctcgccatctacataaacacaaccatgtg
ttgtggtgctcgtcctcggagagaccagacttgggcgggaaggaggcagatgataacagg
ttatgtatggagttggaggagagttctaatgttgaagtgaataaccctggagcctgtccg
actgtgtgtgtagaactagagatctctagtctggctgtcaataccataataaagtctgcc
cacgtgaatgaccaggagggagccagtgcagtcagttttgataccctgcctcagtcctct
ttagaggaaatggtccaaggtcaaggtgctgccacctatcttgccagttatgatgaaaca
gctctctgctctaccagcttcaggattctgaagacgatggtacagggatgggtaagagac
gtcactctctacaataatatatttgcagacaatcagatcattcacttctacaggtggctg
cagtcttccacagctctgttgtatgacccagcactgagaagaactctgcacaacatgatg
aagaaagtctttcttcagttgatatctgaatttaaaagactgggatccaacatagtttac
ggaaactttaaccatctgatcctttgcacaaagaagcggcgcctggtggatgctcttggc
tatgtggagtatattaccaacagcatcaagtccaaggacctattccagattgtggagata
acttatgaacagtgttgggagtaccttgtttggttagatcctgccaaccatgggggtgtg
aaaggacgactgccatctgaaaccccactggagcagacccaacctgacccagaaaaagag
ggtgacagtgaagaggagggggaggaaagggaggaaacggaaatattgaacaaatcggag
aatgaagacgagccagagattgagatgaactggaacatcatgcagtttctaccggaggca
ggtgcttgccaaactaatttcaatttgatagttgcaggatacattttgtcagtgtacaac
cagcttcaggaagagcagaaaatcctgacaccagggagcacacctgtgaaacgacgccac
aacagccagagtcagagagttgtagaaaccaccaccaccacaccacaatcggtgaccttt
gcacaagacctggtggctggagatttagctcaacaaatgtttctaataacacagaaaatt
cacaagaaatttggccatgtgaatgatatgtcaggagagtttccaaaccgaccaggctca
catttagccctgcagaatccagctttagagtttgtcaaatgtgtctgtaaggttctttcc
ttggacagtaacattaacctccaggtgatgaagttaaaacgtgaccttctgaaactgatt
ggagtaggagaatttgctgaggaagcagtcttcactgatccgtgtctatcctacattcta
ccagaggtcatatgtaaatcatgtaaccacattcgtgaccttgacctgtgcagagatcct
tatcttagccaggatagattggattcctcctgggcgtgtgtacgatgtaaggcgccttat
gacatggatgagatagaggatactctccttgatgctgtacacaggaagtcgatggccttc
acactgcaggacctcaaatgtgtcaagtgcaatggagtgaaggaaaacaatatgagaaaa
tactgcagatgtgcaggggacttcaccaacaccatgtcgtcaggggatctggcgaaaact
ttaatgacatttaaaggaattgccagacactacaacatggttttgctgatggaaacggtg
gaatggattttgaaaatgaatcctaaaatgacttctgacaattga

DBGET integrated database retrieval system