Ostrea edulis (European flat oyster): 125680588
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Entry
125680588 CDS
T09123
Name
(RefSeq) transcription initiation factor IIB-like isoform X1
KO
K03124
transcription initiation factor TFIIB
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
125680588
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oed03021
]
125680588
Transcription machinery [BR:
oed03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
125680588
Prokaryotic type
Archaeal type
TFB
125680588
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
RB_B
Cyclin_C
Sigma70_r4
Motif
Other DBs
NCBI-GeneID:
125680588
NCBI-ProteinID:
XP_048776226
LinkDB
All DBs
Position
2:complement(98144064..98156507)
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AA seq
318 aa
AA seq
DB search
MASSSKTKKLPQIFCPEHPDAPLVEDYHAGDMVCPECGLVVGDRVVDVGTEWRTFSNDKT
DKDPSRVGASENPLLEGGDLSTMIATGVGGSEGVLDEHGKPMYRNRRTLNSSDRALINAF
REIGQMADRLNLPRMIADRANTLFKQVHEGKALKGRSNDAIASACMYIACRQEGVPRTFK
EICAVSKISKKEIGRVFKLILKNLETNVELITTGDFMSRFCSNLGLPNSVQKAATHIARR
AVDLDLTPGRSPISVAAAAIYMASQASADKKSQKEIGDIAGVAEVTIRQSYKLMYPKAHL
LFPEDFKFVTPIEQLPAQ
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaagcagtaagacaaaaaagcttccccaaatattctgtccagaacatcctgat
gcacctctagtcgaggattaccatgcaggtgacatggtttgtccagagtgtggccttgtc
gtaggtgacagagtagttgatgtgggaacagagtggaggaccttcagtaacgataaaaca
gacaaagatccttctcgtgtcggtgcttcagagaatcctctattagaaggtggagatctg
tcaactatgatagcaacaggtgtcggtggctcagagggcgtgttagatgaacatgggaaa
cctatgtacagaaatcgaagaactctaaacagttcagacagagctctaataaatgcattt
agagaaattggacaaatggctgacaggcttaacttgccaaggatgattgcagatagagcc
aatacgttattcaaacaagtacacgaaggtaaagctctaaaaggtcgcagtaacgatgcc
attgcctcagcatgtatgtacattgcctgtcgccaagagggcgttccaagaacatttaag
gaaatctgtgctgtatcaaaaatctcaaaaaaggaaatcggacgggtattcaaactgatc
ttaaaaaatctggaaacaaatgtagaattaattaccacaggagatttcatgtcgcgtttc
tgttccaatctgggccttccaaattcggtacaaaaggcagcaactcacattgcccgtaga
gcagtggatctagatctgacaccaggtcgtagccctatttctgtagctgcagctgctata
tacatggcctcacaagcctcagcagacaaaaagtcccagaaggaaattggagatatagcc
ggtgtggcagaggtaaccattagacagtcctacaaactgatgtaccctaaagctcatcta
ctgttcccagaggactttaagtttgttacacccatagaacaacttccagcgcagtga
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integrated database retrieval system
