Ostrea edulis (European flat oyster): 125680887
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Entry
125680887 CDS
T09123
Name
(RefSeq) CCR4-NOT transcription complex subunit 9-like
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125680887
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oed03019
]
125680887
Messenger RNA biogenesis [BR:
oed03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
125680887
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
125680887
NCBI-ProteinID:
XP_048776649
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Position
2:100512599..100527000
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AA seq
305 aa
AA seq
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MATGQLQTGLPPLSQAPPTMSQVDREKIYQWIIELTNPETRENALQELSKKREAVPDLAP
MLWHSFGTVAALLQEIVNIYPAIHPPHLTAHQSNRVCNALALLQCVASHPETRSAFLQAH
IPLFLYPFLHTIHKTRPFEYLRLTSLGVIGALVKTDEQEVITFLLTTEIIPLCLRIMEAG
SELSKTVATFILQKILLDELGLSYICQTYERFSHVAMILGKMVLHLSKEMSARLLKHVVR
CYLRLSDNPRAREALRQCLPDQLKDNTFSSCMKDDNATKRWLMQLQQNLEAPGIPDPRSM
PLHQQ
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaggacagctacagactggtctcccacccctatctcaggcccctcctacaatg
tcccaggtagacagagaaaaaatctaccagtggatcatagaactgacaaacccagagacc
agggaaaatgcattacaagaactcagtaagaaaagggaggcagtgccagacctggctcca
atgctatggcattcctttggtacagttgctgctctactgcaggaaattgttaatatttac
ccagcaatccatcccccccatctcacggctcaccagtccaacagagtatgcaatgccctg
gccttactgcagtgtgtggcctcacacccagaaaccagatctgcatttcttcaggcccac
attcctttgttcctgtatccgtttctgcacaccatccataagacccgcccattcgagtat
ctgcggctgaccagtctaggtgtaataggtgctctagtcaagacagatgaacaagaagtc
ataactttccttctgacaactgagataatcccactttgtctgcgaataatggaggcagga
agtgaactctcaaaaacagttgctacattcattctacagaagattttattggatgaatta
ggtctctcctacatatgtcagacctatgaaagattttcacacgttgctatgattttaggg
aagatggtgctacatttgtcaaaagaaatgtctgccaggcttttgaaacatgttgtccgg
tgctacttgaggttgtctgataacccacgagcaagagaagcacttcgacaatgtctgcct
gaccaactcaaggacaacactttttccagttgtatgaaggatgacaatgctacaaaaagg
tggctgatgcagctacagcagaacttagaggctccagggattcctgatcctagaagtatg
cccctacaccaacagtga
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