Ostrea edulis (European flat oyster): 125681768
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Entry
125681768 CDS
T09123
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase RPAP2
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
oed
Ostrea edulis (European flat oyster)
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oed01009
]
125681768
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oed03021
]
125681768
Enzymes [BR:
oed01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
125681768
Protein phosphatases and associated proteins [BR:
oed01009
]
HAD phosphatases
Fcp/Scp phosphatases
125681768
Transcription machinery [BR:
oed03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
125681768
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
AASDHPPT_N
HSBP1
Motif
Other DBs
NCBI-GeneID:
125681768
NCBI-ProteinID:
XP_048777944
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Position
2:complement(40757215..40767219)
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AA seq
607 aa
AA seq
DB search
MDKQALEAKIRYQVACEEKAHRIVEQLLEPGITEAVLADVGLYITPDHYQDITEERAITK
LCGYPICNNQITKVLGQKYHISTKTNKVYDITDRKNFCSNECYKASVYYQKQISSSPLWS
RKEATPKPITLLPKELNRGSVGKEVIDKQTELYREAKRLRDEEKQELSKKSGWADGETDR
TIENIVVDLEKHHISESESQDDEKSLEKRSSVRREKGKQEDIGDHPQRNTEKHGETSSSA
VLRVPAKSDNDQSKKVTKLMALLDRRKHLLGKLVQDETVQTTAKLDSVKASTNRGSTNRP
DDEENSDEDIDDSCIQSHSEKENKDEEKVVVQGNIAVICEKTTSEAVTEVSDTDKKRKKI
KGNISTTNISYLGMICELMKEWITPETLSFVNCQGEDDEKQAGISTEMEAKIKDLCRRVD
QQEATLDDIIGEEDKLEEELPVRSPAPDYTSLKKETQNFTKQVQDFFAGGKVIIEKESKA
GAPVYLPTVDSHDQLLIRQRIVMDQLNKVIPDLLPSLKLTIQEVFGDMKQLVMTFRLSSK
NILFKPAEWTLVGLLLLKILSRRSLQVACAFLNLSAVQYFSVLLNAIKENMENVDSHVTN
MLQQHGI
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggacaaacaagcattagaggctaaaatacgataccaagtggcttgtgaagaaaaagca
caccgcattgttgaacaacttttggaacctgggataacggaggcagttctagcagatgtt
gggctgtatataacaccagatcactatcaggacataacagaagaaagagcaataaccaaa
ttatgtggatatccaatatgtaataaccagattacaaaggtgctgggccagaagtatcat
atttccactaaaactaacaaggtctatgacatcacagacagaaaaaacttttgcagcaat
gagtgttacaaggcatcagtatactatcagaagcaaatctctagctcaccattgtggtct
aggaaggaggccacaccaaaacctatcactctgcttccgaaggaattaaacagaggttct
gtggggaaagaagtgatagacaaacaaactgaactgtacagagaagcaaaacgcctcagg
gatgaggagaaacaggaactgagcaaaaagtctggatgggctgatggtgagactgacaga
actatagaaaatatagtggtggatttagaaaaacatcacataagtgaaagtgaaagtcag
gatgatgaaaagagtctagaaaaaagaagcagtgtgaggagagagaagggaaaacaggag
gatattggtgatcatccacagagaaatacggaaaaacatggagagacatcttcctcagcg
gtactacgtgtacccgccaagtctgacaatgaccaaagtaaaaaggttacaaaactaatg
gctcttctagacagaaggaagcatttgttgggaaagttagtgcaggatgaaacagtgcaa
acaacagctaaactggacagtgtgaaagcttccactaacaggggatccacaaacaggcct
gatgatgaggagaacagtgatgaagacatcgatgattcatgtattcaatctcattctgag
aaagagaacaaggatgaggaaaaagtagttgtccagggaaacattgcagttatatgtgaa
aaaacaactagtgaagccgttacagaagtatctgatacagacaaaaagaggaaaaaaata
aagggaaatatctctaccacaaacatctcttacttgggcatgatatgtgagttaatgaaa
gagtggataaccccagagaccttgagctttgttaactgccagggggaggatgacgagaaa
caagctggaatatcgacagagatggaggctaaaatcaaggacctctgcagacgtgtagat
cagcaagaggcaactcttgatgacatcataggggaggaagataagttggaagaagaactt
cctgttaggtctccagcaccagactatacatcactgaaaaaagaaactcagaatttcaca
aagcaggtccaagacttctttgcaggtggaaaagtcattattgagaaggagtcaaaggca
ggggcccctgtgtacttgcctactgtagattcccatgaccagctgcttataagacagagg
attgtgatggatcagctcaacaaagtcatacctgatctccttccctcattaaaacttacc
attcaggaggtatttggggatatgaagcagcttgtaatgactttcagactaagcagtaaa
aatattttgttcaaacctgctgagtggacacttgttggtttactgcttctcaaaatttta
tcacggaggagcctccaagtggcatgtgccttcttgaacctatcagctgtacagtatttt
tccgttctcctaaatgccatcaaagaaaacatggaaaatgtggactctcatgtaaccaat
atgttacaacaacatggcatatga
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