Ostrea edulis (European flat oyster): 125682007
Help
Entry
125682007 CDS
T09123
Name
(RefSeq) N-glycosylase/DNA lyase-like
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
125682007
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oed03400
]
125682007
Enzymes [BR:
oed01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
125682007
DNA repair and recombination proteins [BR:
oed03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
125682007
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
HHH
Motif
Other DBs
NCBI-GeneID:
125682007
NCBI-ProteinID:
XP_048778335
LinkDB
All DBs
Position
2:41468003..41475546
Genome browser
AA seq
414 aa
AA seq
DB search
MPPLLEGKMSAPFSSGRILCNISEIRLDRILVSGQSFRWKEEKPGFWTGVLYDRIWKLWQ
SETAIFYQIFGNSKTQSESASDIVKTSGAVKRSELIPKVIKDSELKEKILTNSISEELRT
YENIYEELIKDYFQLNVNIATLYEKWSELDSNFQFISAKFEGIRMLRQDPVENLFSFICS
SNNHISRISSMIEKLCENYGRAVGQLDGKTYFSFPTVSEMSDEGVESELRNLGFGYRAKY
INKSARQILDKGGETWLKSLRGRPYDEAKKELMTLNGVGAKVADCVCLMSLDKTEAVPVD
THVWQIAARGYMPRLSKCKSLTDKLYNEIGDHFRTLWGPYAGWAQAVLFTADLKQFKEKD
ASPSNNQAEKPEIGTKTENSAKKRKATASKSEGNSVENCLGKAITARKRKQKKS
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgcccccattattggagggaaaaatgtctgccccctttagcagtggtcgaattttatgt
aatatatccgagatacggttagataggattcttgttagtggtcagtcattcagatggaaa
gaagaaaagccaggattttggacgggtgttttatatgacagaatatggaaattgtggcaa
tcagaaactgcaatcttttaccaaatctttggcaacagtaaaacacaatcagagtcggca
agtgatatcgtgaaaacatcaggtgctgtcaaaagatcagaactaatccccaaagtcata
aaggactccgaattgaaggaaaaaatactcacaaattcaatatcagaagaattaagaaca
tatgaaaatatttatgaagagttgattaaggattacttccaactaaatgtaaacatagca
acactatatgaaaaatggtcagaacttgattccaattttcagtttatttctgccaaattt
gaaggaataaggatgttacgtcaggatcctgtagaaaatttgttctcgttcatttgttca
tcgaataatcatatctcaagaatttcatctatgatagagaagctttgtgaaaattatgga
agagctgttggacagttagatgggaagacttactttagttttcccacagtttctgagatg
tctgatgaaggagtcgagagtgagttacggaacctaggatttggatatagggcaaaatat
atcaataagagtgcaagacagattttggataaagggggcgagacttggctgaaatcttta
agaggaaggccatatgatgaagcaaagaaagagttaatgaccttgaatggagtgggagca
aaggtagccgactgtgtctgtctgatgtctctagacaagacagaagcggttccagtggac
acacatgtctggcagatagcagcaaggggatacatgccaaggctctctaaatgcaaatct
ctgacagataaactctacaatgaaataggagaccattttaggaccctctgggggccttat
gctggttgggcacaagctgtgcttttcactgcagatttgaagcaattcaaagagaaagat
gcatctccttcaaacaaccaagcagagaaaccagaaattggtacaaaaactgaaaactct
gcaaaaaagagaaaggctacagcatcgaaatctgaaggaaacagtgtggagaattgtctg
ggaaaagcaatcacagctcgaaagaggaagcagaagaaatcttga
DBGET
integrated database retrieval system
