Ostrea edulis (European flat oyster): 125682042
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Entry
125682042 CDS
T09123
Name
(RefSeq) F-box/LRR-repeat protein 6-like isoform X1
KO
K10272
F-box and leucine-rich repeat protein 6
Organism
oed
Ostrea edulis (European flat oyster)
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oed04121
]
125682042
Ubiquitin system [BR:
oed04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
125682042
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LRR_At5g56370
LRR_4
F-box-like
F-box
LRR_NXF1-5
LRR_8
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
125682042
NCBI-ProteinID:
XP_048778370
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All DBs
Position
2:3759103..3768315
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AA seq
484 aa
AA seq
DB search
MKRCRKGILGVKKDPKNQILFSFSAREGEEWPSDDSDSDFVPSDEDDKPKKKRQAKSGVK
SRTESPAKLNNAQEKGVICASLPEEIWIYIFGFVVKETGPLPFLCRAAKVCQLWRNIASH
PSLWRKVDLSFGWIRTKRDTLRWLVQERLTQCAEINLTNWAITNDQLKMVLQNCHELKSI
NLSHCKKISQDGFTALVDNCTNLQGVDVSFTSISVGTLKDITLKHGLLQLKELHLGGNYY
LNFPALANSIFENCPQLEVLDASNCRFSGDYVSMDVQKFQTGCPKLRVLRMGSSQFRLKK
TSGSLPGFEELRELSLGCIDLSKSCGISTAFVYDILVKSSKLKLLDLGGCWNMEDMTPLL
GLPFTELEQLYLSNSPIRLNYLLGPLLQKCNHSLRILHIDKNIFKEDSLDSALQELFPQF
GSSPLEMISAAETNISESSVEIILRHCGNLQYINLSSCRALPRGIKREYRNAEIKTLKSF
CGIK
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagatgccgcaaagggattcttggtgtaaagaaagacccaaagaaccaaatccta
ttttcgttttctgcaagggaaggcgaagaatggccttcagatgattcagactcggatttc
gtaccgtcagatgaggatgataaaccgaaaaagaagaggcaagccaaatcaggtgtcaaa
tcaaggacagagtcacctgcgaagctaaataatgctcaggagaaaggagtcatttgtgcc
agtctgccagaggaaatctggatttacatttttggatttgttgtaaaagagactggtcca
ttgccttttctatgcagagcagcaaaagtgtgccagttatggcgtaatattgcaagtcat
ccgtcattgtggaggaaagtggacttgtcttttggatggattcgtaccaaacgggatacg
ctccgttggttagtccaggaaaggctcactcagtgtgcagagatcaacctcacaaattgg
gccataacaaacgatcagctcaagatggttctacagaattgtcacgaattgaagtctata
aatctttcacactgtaaaaagatatctcaagatggattcacagctttggtagacaactgc
acaaatctgcagggagtggatgtttcatttacctccattagtgttggcaccctgaaggac
atcacattgaaacatgggctgctccaactgaaagaattacacttaggtgggaattactac
ctgaactttccagctctggcaaacagcatatttgaaaattgtccacagcttgaggtttta
gatgcatccaactgtcgattttcaggagactatgtaagcatggatgttcagaagtttcag
acgggctgcccaaagttgagggtacttcgaatggggagttcccaattcaggttaaagaaa
acaagtggatccctgcctgggtttgaagaactgagagagctgagtttggggtgcatagat
ctgagtaaaagttgtggaatcagtacagcttttgtttatgatattctagtgaaatcttcc
aagctgaagttgttggatcttggaggttgctggaacatggaggacatgacccctcttctt
ggcctccctttcacagagcttgaacagctgtatctgagcaactcccctatacgtctcaat
tacctactcggacctctgcttcaaaagtgtaaccacagccttcggatcctccacattgac
aaaaacatcttcaaggaagactctctagattcagcattacaggagctcttccctcagttc
ggcagtagccccctagaaatgatcagcgctgcggaaaccaacatcagcgagtccagtgtt
gagattattctgaggcactgtggaaacctgcagtacatcaatctgtcatcgtgccgtgct
cttcctagagggatcaaacgcgagtacagaaatgcagagatcaaaacactaaagtcattc
tgtggaatcaaatga
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