Ostrea edulis (European flat oyster): 125682062
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Entry
125682062 CDS
T09123
Name
(RefSeq) ATP-dependent RNA helicase DDX39A-like
KO
K13182
ATP-dependent RNA helicase DDX39 [EC:
5.6.2.7
]
Organism
oed
Ostrea edulis (European flat oyster)
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oed03041
]
125682062
Enzymes [BR:
oed01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
125682062
Spliceosome [BR:
oed03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
125682062
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
CMS1
DUF4844
Motif
Other DBs
NCBI-GeneID:
125682062
NCBI-ProteinID:
XP_048778403
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All DBs
Position
2:complement(101320617..101325024)
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AA seq
350 aa
AA seq
DB search
MDVLCQAKSGMGKTAIFVLSTLQQIQQPCDSVMVLAIAHTRELANQIADEYRAFSKYMPE
MRVAMFFGGLPIKKDEELLSRNHPNIVVGTPGRLLALVQKQKLNLSSLRYFIVDECDQIL
KENGMREDVQTIFLKSPRDKQVLMFSATLNQDTRNICRRFMNDPIEVTIEDESKLTLHGL
QQYYLTVEEKEKSRKLCDLLDQLDFNQVIIFVKTVGRCQALAGVLMDQNFPVLTIHRAME
QTERLTRYRQFKDFQKRILVATDLFGRGMDIDKVNLVINYDTPEDSDTYLHRVGRAGRFG
TKGLAVTFVSGQPEATVMNSVQDRFDVKMEKMPAEMDFSCSTFIDAKSSA
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggatgtcctgtgtcaagccaaatcaggaatgggaaagacagctatttttgttctctcg
acactccaacaaattcaacagccttgtgatagcgtcatggtgttagccattgcacacaca
agggaacttgcaaaccagatcgcagatgagtaccgggccttttcaaaatacatgccggaa
atgagagtcgccatgttttttggtggactaccaatcaagaaggacgaggagctgctgtca
agaaaccaccctaacattgtagtgggaaccccgggtcgactgctggctctggtgcagaaa
caaaaactcaatctaagcagcctccgctatttcattgttgacgaatgtgaccaaatcctc
aaggaaaatggtatgagagaagatgtgcagaccattttcttgaaatcacctcgtgataaa
caagttctgatgttcagcgcaacactcaaccaagacacgaggaatatatgcaggcgattt
atgaacgatcccattgaagttacgatagaggacgagtctaagctgacgctccatggacta
caacaatattatcttacagtggaagagaaggagaaatcgaggaaactctgcgatctgtta
gatcagcttgattttaatcaggtcattatctttgtgaaaacagttggtcgctgtcaggcg
ttggcgggtgttctgatggatcagaatttcccagtgttaacgatccacagagcgatggaa
caaactgagagattgacgaggtaccggcagttcaaagacttccaaaagagaatactcgtg
gctactgatttatttggtcgaggaatggacattgacaaagttaacctagtcattaattac
gacacaccagaggattcggacacttatctccacagagtgggtcgagctggtcgatttggg
acgaagggattggctgttacatttgtctccggtcagccagaagccactgttatgaattct
gttcaagatcggtttgatgtgaaaatggagaagatgccagcggagatggacttctcttgc
agtacgttcattgatgctaaatcgtctgcttga
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