Ostrea edulis (European flat oyster): 125682156
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Entry
125682156 CDS
T09123
Name
(RefSeq) protocadherin-9-like
KO
K16498
protocadherin delta 1
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
125682156
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oed01009
]
125682156
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oed04515
]
125682156
Protein phosphatases and associated proteins [BR:
oed01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
125682156
Cell adhesion molecules [BR:
oed04515
]
Cadherins
Protocadherins
125682156
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Fibulin_C
Orf78
Motif
Other DBs
NCBI-GeneID:
125682156
NCBI-ProteinID:
XP_056013024
LinkDB
All DBs
Position
2:complement(68584918..68609174)
Genome browser
AA seq
1035 aa
AA seq
DB search
MAVLISVCLFLMVANVASGEIIVTMKLWEEEPVSTFVGNIADLSGLQENMTQEAFQSLRY
SFLDQTRMDDLFRVDNAAGELFTNAVIDREKQCGFNQDCVLQFDIAAHSSINSKFEIISV
RVTLLDINDHTPTFPSSDVNKSLSESAVIGSTIQLDEALDLDSSAQNGIKNYALQTTGSP
FLFSAIKASDGFSLQLKLNSAINRESKDHYDLKIIAVDGGTSQKTGTLNVKVEVTDENDN
APQFDRDTFDIRLREDKNTGFQLIQLSATDADIGQNGQVVYKFNPRQSYLSEINECFEID
ETTGKIILKNRLTRNIRKIYNITVDASDLGQPPKVSQCIVRVTIIDVGNNQPSVRITLLS
TGNTGAVSESSSVGTVIAHVTVEDTDSGSNGIVTCKVVSDEFQLQTVLNKGYIVVINRSL
DREISDKYNLTVECSDQGTPPLSSSSTIVIPISDENDNAPEFYKTLYQASIRENNAFGDG
VTQVLAKDDDLDKNAEIRYLLPPASKEKLAINEETGVITANFRFDRENVSSFFFHVLAVD
KGNPTMTGTATIQLTVVDENDNKPTFSVPMFQFFVIENMGPQMKVGSLSASDLDEGDNQK
ILFDYHPNFKNLPSSQLPFEILPSGIISTRRDLDREDKNKYSFDIVAVDQGTPRLTSTSR
VVVYVADQNDNKPFITFPLFSNQTVSVSHQAKVGTVITRIRAYDLDEIGPNSQLRYSFSA
GNEKDVFSIGETSGNIYLKRTYEVNENTPFKLRINVSDMNVSHMQSSFCDLTIVLALPTP
SPLSSEDGGTKNIIITIAVVVLTIILSAVIITVIIILRRNDQKLLQSKRSDDLVKTMYSA
ASIEGCSSPNLDKIPSDMVTSIVDSPRKKKGVSFTFDVESLQLSNCGQIGQGQREESSYN
RQNNNDKTLNSVLLDNIGRSNYQQQHQDNMSDSSGEITTSDSGRGGSDLDLSLHMSKSDE
RHQTGAFKFKMNPAQGTRSYGNQYENINYINTHHLKSNIQREAIPVRPPRLPSDNELQFR
SEESPSKEDCFPSYV
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgctgatctctgtgtgccttttcctgatggttgcaaatgtagcctccggtgaa
atcatcgtgacaatgaaattgtgggaagaggaacctgtctcaactttcgtgggaaatata
gctgatttgagtggcttgcaggaaaatatgacacaggaggcttttcagagtcttcgatac
agctttttggaccaaacaaggatggatgatctttttcgagtggataatgctgctggtgaa
ttgtttaccaatgcagtgattgacagagaaaaacagtgtggatttaatcaggattgtgtg
cttcaatttgacattgcagctcactcttctattaactccaaatttgaaataatatcagtg
agagtgactctgttggacatcaatgaccacacccccacctttccttcctcagatgtcaac
aaaagtttgtctgagtcggcagtcattggatccacaatacagctggatgaggcgctggac
cttgactcgtcagctcagaatggaataaaaaattacgcactgcaaactactggttctcca
ttcctgtttagtgccattaaagcaagtgatggattctctctacagctgaagctgaattca
gcaatcaacagagagagcaaggatcattatgatcttaaaatcatagcagtggatggtgga
acgtctcaaaagactggaactctaaatgttaaggtggaagtgactgatgagaatgacaat
gcacctcaatttgacagagacacttttgatattagacttagagaggacaaaaatactggc
tttcagttgattcaactctcagcaacagatgctgacattggacaaaatggtcaagtggtt
tataaattcaatcctcgtcaaagctacctaagtgaaatcaatgagtgctttgaaattgat
gaaaccactggcaaaattattttgaaaaacaggttgacacgaaacataaggaaaatttac
aacatcactgtagatgccagtgatttaggacaacctccaaaagtttcccagtgcattgtt
cgggttaccatcattgatgttggaaataaccaaccatcagttcgcatcacattgctgtct
acaggcaacacaggggctgtcagtgagtcctcaagtgttggcaccgtgattgctcatgtc
actgtcgaagacactgactctggttccaacggaattgtcacttgcaaagttgtctcagac
gagtttcagctgcagacagtacttaataaaggctacatagtggtcatcaacagatctctt
gatcgtgaaatttctgacaagtataacctcactgtggagtgcagtgatcagggaacaccc
cctttatcctcatcttcaacaatagtgattcccatatctgatgaaaatgacaatgcacca
gagttttacaagactttatatcaagcatccatcagggaaaacaatgcttttggggatgga
gtcacacaagttctagcaaaggatgacgacttggataagaatgctgaaataagatattta
ctgcctcccgcgtccaaagaaaaactagccatcaatgaagaaactggagtcataacagca
aactttagatttgacagagaaaatgtttcttcgttctttttccatgttcttgctgttgat
aaggggaatcctactatgacaggaactgctacaatccagctgactgtggtggatgaaaat
gacaataagcctacatttagtgtgcctatgttccaatttttcgtaatagagaacatggga
cctcagatgaaagttggatcactcagtgcctcagacctggatgaaggtgacaaccaaaag
attctttttgattaccatccgaattttaagaatctccccagcagtcagctgccatttgag
attttaccttcaggaataatttctacaaggcgagaccttgacagagaggacaaaaacaag
tattcgtttgacatagtggctgtggatcaaggaaccccaaggttaaccagcacaagtcga
gttgttgtgtatgtggcagaccaaaatgacaacaaacccttcattaccttccccttgttt
tctaaccaaactgtctcggtgtctcatcaagctaaagttggtactgtaatcacacggatt
cgagcttatgaccttgatgaaatcggaccaaacagtcaactcaggtactctttttctgct
gggaatgagaaggatgtcttctccatcggtgaaacctcaggaaacatatatctcaaaaga
acttatgaagtaaatgagaatactccatttaagctcaggatcaatgtcagtgatatgaat
gtctctcatatgcagtcttcattctgtgatttgaccatcgtcctagctcttccaacacca
agccctctgtcctcagaggatgggggaacaaagaatatcattattaccatagctgttgtg
gttctcaccatcatattgtcagctgtcatcatcactgtcatcatcattctcagacgcaat
gatcagaaactgctgcaaagcaaacgctcagatgatctagtaaaaaccatgtacagtgct
gcttccattgagggctgctcatctccaaacttggacaagatccccagtgacatggtgacc
agcattgtagactcgcctcggaagaagaagggggtcagctttacatttgatgtggaaagt
ctgcagctttctaattgtggccaaataggccaaggacagcgagaggagagttcatacaac
agacaaaacaacaatgacaagaccctaaattcagtgctgttagataatattggaagatca
aattatcagcagcaacatcaagataacatgagtgattcatcaggggagataaccacatca
gacagtggtagaggtgggagtgaccttgacctttcactacatatgtcaaaatcagatgaa
agacatcagacaggtgcttttaaattcaaaatgaatcctgctcagggcactagatcatat
ggaaaccagtatgaaaatataaactatataaatactcaccatttaaagagtaatattcaa
agggaggcaattcctgttagacctcccagacttccttcagataatgaactgcagtttcgt
tcagaggaatccccctcaaaagaagattgttttccatcgtacgtatga
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integrated database retrieval system
