Ostrea edulis (European flat oyster): 125682545
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Entry
125682545 CDS
T09123
Name
(RefSeq) CCR4-NOT transcription complex subunit 7-like isoform X1
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125682545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oed03019
]
125682545
Messenger RNA biogenesis [BR:
oed03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
125682545
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
125682545
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
DUF6786
Motif
Other DBs
NCBI-GeneID:
125682545
NCBI-ProteinID:
XP_048779141
LinkDB
All DBs
Position
2:86498010..86528884
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AA seq
297 aa
AA seq
DB search
MPSVAQTEYGIKDVWNSNLEEEFKKIRHVIQRYRFVAMDTEFPGVVARPIGEFRSTSDYQ
YQLLRCNVDLLKIIQVGLTFMDENGQTPSPISTWQFNFRYNLTEEMYAQESIDLLQHSGI
QFKKHEEEGMDVNDFAELLMTSGIVLSDQVKWLSFHSGYDFGYLLKILTNTQLPAEEADF
FDYLRIYFPNIYDVKYLMKSCKNLKGGLQEVAEQLEITRIGPQHQAGSDSLLTGAAFFKM
REMFFEDNIDDAKYCGHLYGLGTSYVQNGSGYESLTSYQNHNSTPTLEDSNSTSAGS
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcggtagcacagacagagtatggcatcaaggatgtctggaacagcaatctcgag
gaagaattcaaaaagatccgccatgttattcaacgctacagattcgttgccatggataca
gagtttccaggagtggtggctcggcctatcggggaattccgaagtacatctgactatcag
tatcaactgctcaggtgtaatgtagacttactgaaaataatccaagtggggctcaccttt
atggacgagaatggtcagaccccatcacccatatcaacatggcagtttaattttagatac
aatttaacggaagaaatgtatgctcaggaatcaatagatctgcttcaacattcgggcatt
cagttcaagaagcacgaggaggaaggaatggacgtgaatgacttcgctgaactattgatg
acatcaggaattgtgctgagtgaccaggtcaagtggctgtcatttcacagtggctacgac
tttgggtatcttttgaagattttgacaaatacacagttaccagcagaggaggcagacttt
tttgattatcttaggatttacttcccaaacatctatgatgtcaagtatctaatgaagagt
tgtaaaaatttaaaaggagggctacaggaagtggctgagcagttagagatcactagaata
ggccctcaacaccaagctggtagtgacagtttgctgaccggagctgcattctttaagatg
agagagatgttctttgaagataacatcgatgacgccaaatactgtgggcatctttatgga
cttggtacatcttatgttcagaatggctcaggatatgaaagtttgacaagttatcaaaac
cacaactccactcctacactagaagactccaattcaacgtctgcaggctcatag
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