Ostrea edulis (European flat oyster): 125682554
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Entry
125682554 CDS
T09123
Name
(RefSeq) transcriptional regulator ATRX-like isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
oed
Ostrea edulis (European flat oyster)
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oed03000
]
125682554
03036 Chromosome and associated proteins [BR:
oed03036
]
125682554
Transcription factors [BR:
oed03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
125682554
Chromosome and associated proteins [BR:
oed03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
125682554
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
125682554
NCBI-ProteinID:
XP_056011589
LinkDB
All DBs
Position
2:95049989..95102832
Genome browser
AA seq
2055 aa
AA seq
DB search
MFFILVNWSLRYPCYEYIMLYFRKPTSTKRADSDEERETNGADDSDNQMEYLPEGTVVVN
PEPVEKKGTFTGPEFRSKKKESSIDFSSKGLGRVSCTACGEQVNTNKSGSVRKHPQLKVL
VCKNCYKYHTSGPISQDADGLDEQCRWCSEGGKLFGCDFCHNAFCKSCIIRNLGRSEISI
VTEDGKQWKCYVCDSTALKPLRKECQRVLSHMEAEEKKTKEKMKQQQGAINGATKSKDSK
MEASEFKSGNKASKPTENKQLMKVMTTSNTSSRSSSPSEFQKAILTQPHAGTTINTEKIV
VDPNSGKTTKFEMVYPNANIVRTQSKPFARPIQSMSSNLPTEGPSMSFTGLLPGNVHSIT
SNLLSMTDNLQQLLKNIQENVIAESNLDKLPFEISLRTLSQEQLKARLSAVSCVKSGVNL
FLQEMAMKTSAAGVKAMNLSQQGSHPALASVLLTGSPLDRNGSSMKVETPQKFDKPGGAN
SPLVTSTPKAKAEEEDSDVVVLSPSPMETDSQKLDASNANCTSQDDNDSTRVTENAKAEQ
ELIKDAAEEVGSENEDSHHEESKEKKEKKGKGKLVVKLKMVSKKVKSGKSEPVEEEGDST
KDNEDVSSTTKEDEGEESSTRKTRNKGIDGTDSEACKPIRKKRCKSQDTNSDSDKNQTRG
KDQSKTDTDKKTDKGDLSLKKTKNASKVKRDKSNGNEKSKDVDTTDKDDSESDDTEKESD
DGDDSDDEDFNVSKPRRSSRKSNRSASEKKPAKKKRKEVDSSDYNSDLEKDIEKLAKTPA
KSSKSRTTKKTAKKEKSSSKSKACDRKKKTDKKKGTSGGESSSSDATEEDTDNTEVDEPE
GEIDMDCSANAKAKEELLKEMEEEVTDEEDKDSSNDEEEDKDSSDSEVIITPRKTRKAVK
KGKLSIDSESETEEDVPKRKRKKDDLLDAKLSSSDSDVVPKSKRKKRKAESSSSEKNETD
SEEEFITLGKKKKKPAKGGKKKAGTGKARKRRRIKAPSSSDDEEAVSDEDNDEAESGSGD
DDDPDTPKRLKRKKIRKIKSEKKLTSVTKSAVKAEEERRRRIAEKQKLFNGIVQEVDESS
PTKCPLTKQLVLDFEEETKKPLIEVDKGLVVKLKPHQVEAVQFVWDCTYESLKRAKKEEG
SGCILAHCMGLGKTLSLITFIHTMLTNSKKTKVSTCLIVAPLNTVLNWQYEFEMWQEFTR
KEVDVYEISSVKQNVDRATALKNWHSDGGVMILGYDMLRNLTQGSHCRSKNQKKIFTETL
VDPGPDLVVCDEGHILKNDQSAISKAMNKIKSQRRVVLTGTPLQNNLIEYHCMVNFVKPN
LLGTSKEFRNRFVNPITNGQCADSTAHDVKIMKRRAHILHEKLNGCVQRKDYSSLTKYLP
PKHEYVIAIRLSPMQISLYENYLRLAGFGTDSAPRANRGAKLFADYQALMRIWTHPWVMK
MDEIRQENKKKKKNLKGKVLDMMFDDESDFLDDSNDSDGGGSDSSNSSSSSSPSEVSVKS
NCSGGSRKTRSKRTKTGSDQEEEASDSDSKKKDEVVKKWTTRRQRGDISEPEEEMGPQPV
STEWWAEYVKPEDEEKIELSGKLVLLFEILRMSEEIGDKVLVFSQSLLSLNLIEKFLDRI
DKKHREEAEKDKDKEDEKKSDDGKKEDKKKSDDEKKEDKKKSDDDKKEDEKKSDDDNKNE
EGEQFGKHWTLGEDYFRMDGSHSAQARKDMASKFNDPENYQCRLFLISTRAGGLGINLVA
ANRVIIFDASWNPSHDVQSIFRVYRFGQDKPVYVYRFLAQGTMEEKIYERQVTKQSLSQR
VVDEHQIDRHFNSNELSELYSFKPDRLDDPNRVEKTPMLPKDFMLAELMKSQKDWFVNYH
EHDSLLENKIGEELDEEERKAAWDEYENERKGVLQMRQNFMANMPNMGFNNMVQNMQQQS
QMGFPYGYNQMFNMQAFTQQNLLQLVHDMKERYPHLPQEQLTQQVQTVIRQMVSRQIAAQ
QDAQKRQMAQKELQHQRELQRIQSQIRQQQMQLMQATMAGQGTSGLQGEARGMQSLLNPP
TNNMALYQQRREPKK
NT seq
6168 nt
NT seq
+upstream
nt +downstream
nt
atgtttttcatccttgtgaattggtcattgagatatccttgttacgaatacatcatgtta
tatttcaggaaaccaacaagtacaaagagagcagattcagatgaagagcgtgaaacaaat
ggtgctgatgattctgataaccagatggaatacttgccagaaggaacagttgttgtaaat
cctgaacctgttgaaaagaaaggaacgtttacaggaccagaattccgttcaaagaagaaa
gagtccagtatagattttagttccaagggcctaggtagagtgtcttgtacagcatgtggg
gagcaagtcaacaccaacaaatctggcagcgtgaggaaacaccctcagctaaaggtctta
gtttgcaagaattgctacaaataccacaccagcggaccaatatctcaagatgcggatggg
ttggatgaacagtgtagatggtgtagtgagggaggaaagttgtttgggtgtgatttctgt
cacaatgccttctgcaagagttgcatcatcaggaatttagggagatctgaaatcagcatt
gttacagaagatggtaagcaatggaaatgctatgtatgtgatagcacagcattaaagcct
ctgcggaaagaatgtcagagagtcttgagtcacatggaggccgaggaaaagaaaaccaag
gaaaaaatgaaacaacagcagggagcaataaatggtgccaccaagtctaaggattctaaa
atggaagcctcagaatttaagtcaggaaacaaagctagcaaacctacagaaaacaaacaa
ctgatgaaggttatgactaccagcaatacatcatctcgttcctcatctcccagtgaattc
caaaaagccattcttactcagccacatgctggaacaacaatcaatacagagaaaattgta
gtagatcctaatagtggcaagaccacaaagtttgagatggtgtatccgaatgctaatatc
gtacggactcagagtaagccttttgcacggcctatacaatcaatgtcgtccaaccttccc
actgagggtccatctatgtcatttactggacttttgcctggaaatgttcatagtatcact
tctaacttgctttcaatgacagacaatcttcaacaattactgaaaaatatacaggaaaat
gttatagcagaatcaaatttagataaattaccatttgaaatttctctccgaacattgagt
caagagcagctgaaagcccgtctttcggctgtaagttgtgtaaaaagtggtgttaacctg
tttttacaagaaatggcaatgaagacgtctgctgcaggagtgaaagcaatgaatctaagt
caacaaggatctcatccagcacttgcttctgtcttgctaacaggaagtcctttggataga
aatggttcatcaatgaaagtagaaactcctcagaagtttgataaaccaggcggagcaaat
tctcccttggtaactagtacccctaaagccaaagccgaggaggaggattcagatgttgtt
gtgcttagtccttcgccaatggaaaccgatagtcaaaaactggatgcatcaaatgcaaac
tgtacgtcacaggatgataatgacagtacaagggttacagagaatgctaaagctgaacaa
gaactgataaaggatgctgctgaagaagtaggaagtgaaaatgaggattcacatcatgaa
gaatccaaagaaaagaaggagaaaaaaggaaaaggaaaactggttgtaaaattaaaaatg
gtatccaaaaaagtcaagagtggaaagtctgagccagtggaagaggaaggggattcaact
aaagataatgaagatgtttcttccacaacaaaagaggacgaaggagaggagagttccaca
aggaaaaccagaaacaaaggcatagatggaacagattccgaagcatgcaaaccaatcagg
aaaaaacgatgtaagtctcaagacacaaacagtgattcagacaaaaaccagaccagaggt
aaagatcagtccaaaactgatacagataaaaagactgacaaaggggatttgagtttgaaa
aagaccaaaaatgcatcaaaggtgaaaagggacaaaagtaatggtaatgagaaatctaag
gatgttgatacaacagataaggatgacagcgaaagtgatgacacggagaaggagagtgat
gacggtgacgacagtgatgatgaagattttaacgtgtcaaagccccgtcgttcctccaga
aagtcaaatagatcagcatcggagaaaaagcctgcaaaaaagaaaaggaaagaggttgat
tcatctgattataattcagacctcgagaaagacattgaaaaattagccaagacccctgct
aagtcttcaaagtctcggacaaccaagaagacagccaaaaaggagaaatcctccagcaag
tcaaaagcatgtgatagaaaaaagaaaaccgacaaaaaaaaaggaacttcagggggtgaa
agctcttcttctgatgctacggaggaagatactgacaatacggaagttgatgagccagag
ggagaaatcgacatggattgctcagcaaatgccaaagccaaagaggagttgttaaaagaa
atggaagaagaggtgacagatgaggaggacaaggacagcagcaatgatgaggaggaggac
aaggacagcagcgattctgaggtcataattacaccaagaaaaacaaggaaggcagtaaag
aagggaaagttatctattgactctgaaagtgagacagaagaagatgtaccaaaaagaaag
aggaagaaggatgaccttctggatgctaaactttcaagcagtgactcagatgttgtaccc
aaaagcaaaaggaagaagaggaaagcagaatcttccagtagtgagaaaaatgaaacagac
agcgaggaagaatttatcacattaggaaagaagaagaaaaagccggctaaaggtggtaaa
aagaaggcaggcacggggaaagctaggaagaggcgaagaatcaaagctcctagcagttct
gatgacgaagaagctgtcagtgacgaagacaacgatgaggctgaaagtggatctggggac
gatgatgatcctgatacaccaaagagactgaaaaggaagaagataaggaagattaaatct
gaaaagaaattgacctctgtgaccaagtcagctgttaaagctgaagaagaaagaagaagg
aggatagcagaaaagcagaaattgttcaatggtattgtgcaagaagtggatgagtcatct
cccaccaagtgccctctaacaaagcagctagttttggactttgaagaagagaccaagaaa
cctctcattgaagtggataaaggactagttgttaaactgaaaccccaccaagttgaagct
gtacaatttgtttgggattgtacatatgaatcactgaaaagagctaaaaaggaggaagga
tctggttgcatcttagctcactgcatgggtcttggaaaaaccttatccctaataacgttt
attcataccatgctaaccaatagcaagaagacaaaggtgagcacctgtcttatcgtggcc
cccctaaacaccgtccttaactggcagtacgagtttgaaatgtggcaggaatttaccaga
aaggaagtagatgtgtatgagatatcttcagtgaagcagaatgtggatcgagctacagcg
ctaaagaactggcacagcgatggtggagtgatgatcttgggatatgacatgttaagaaac
ctcacacaaggcagtcactgtagaagcaaaaaccagaagaaaatattcactgaaaccctg
gtggacccaggaccagatttagttgtgtgtgatgaaggccatattctaaagaatgaccag
tctgccatatccaaggccatgaacaagatcaagtcacaacgaagagtagtgctaactgga
actccattacagaataacctgatagaatatcactgcatggtcaattttgtaaaacctaat
ctgttgggaacaagcaaagagtttcgcaaccgatttgtcaacccaatcacaaatggacaa
tgtgctgactctacagctcacgatgtgaagatcatgaagagacgagctcacatcctccat
gagaagctgaatggatgtgtacagagaaaagactacagttcacttacaaagtatttgcct
ccaaaacatgagtatgtgatcgctattcgcttatcaccaatgcagatatctctgtatgaa
aactacttgcgtttagctggatttggaacagattctgcgccaagggccaaccgtggggcc
aagctgtttgccgattaccaggcgttaatgcgaatctggacacatccatgggtcatgaag
atggatgaaattcgtcaagaaaataagaaaaagaaaaaaaacttgaagggaaaggtattg
gatatgatgtttgatgacgagtccgactttttggacgattccaatgacagtgatggtggc
ggctccgattcctccaattcctccagctcgtcctcgccatccgaggtttctgtgaagtcc
aattgttccggaggaagccgcaagacccgcagcaagagaacgaaaacgggatctgaccag
gaagaggaagcctctgacagcgattcaaagaagaaagacgaagttgtcaagaaatggacc
acaagaagacaacggggtgacatcagtgagccagaggaggaaatggggcctcaacctgtc
tcaacagagtggtgggcagaatatgtcaaaccagaggatgaggaaaaaatagagctcagt
ggaaaactagtcctgctatttgagattctacggatgagtgaggaaataggagataaagtg
ttagttttcagccagagtttactgtccttgaatttgatagaaaagtttctggatcgaatt
gataagaaacacagagaagaagctgaaaaagacaaagacaaggaagatgaaaagaaatca
gatgatggcaagaaggaagataaaaagaaatcagatgatgaaaagaaggaagataaaaag
aaatcagatgatgacaagaaggaagatgaaaagaaatcagatgatgacaataaaaatgaa
gaaggagagcagtttggaaagcattggaccctgggagaggattacttcagaatggatgga
tctcatagtgctcaggccaggaaagacatggcttcaaaattcaatgacccagaaaattat
caatgtagactatttctgatttccacaagggctggaggtctaggaattaacttggttgct
gctaacagagttatcatttttgatgcttcgtggaatccctctcatgatgtgcagtccata
ttcagagtctatcgattcggacaagacaaacctgtttatgtttacagatttcttgctcag
ggaactatggaagaaaagatctatgaacgtcaggttaccaaacagtcactgtcccagaga
gtggtagatgaacatcagatagaccgacatttcaattccaatgaactttctgagctgtat
tcattcaagccagacagactggatgaccctaacagagtggaaaagacacccatgctccca
aaggactttatgcttgctgagctgatgaaatcacagaaagactggtttgtcaattatcac
gagcatgattcccttctggagaataagatcggagaagaattggatgaggaagagagaaag
gcagcctgggacgagtatgaaaatgaaaggaagggtgttctgcagatgaggcagaacttc
atggcaaatatgcctaatatgggtttcaacaacatggtgcagaatatgcaacaacaatcc
caaatggggttcccgtacggttacaatcagatgttcaatatgcaggcctttacacagcag
aatcttcttcagttggttcatgatatgaaagaaaggtatccacacttgccacaggaacaa
cttacacagcaggttcaaacagttataagacagatggtgtcccgacaaattgcagctcaa
caggatgctcagaaaagacaaatggcacagaaagagcttcaacatcagagagaactacaa
agaattcagagccagattcgacagcaacagatgcagttgatgcaggccacgatggctgga
caaggaacatcaggacttcaaggggaagcccgtggtatgcagtccttgttgaatccgcca
acaaataacatggctctataccagcagaggagagaaccgaagaaataa
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integrated database retrieval system
