Ostrea edulis (European flat oyster): 125682747
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Entry
125682747 CDS
T09123
Name
(RefSeq) probable ATP-dependent RNA helicase DDX27
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
oed
Ostrea edulis (European flat oyster)
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oed03041
]
125682747
03009 Ribosome biogenesis [BR:
oed03009
]
125682747
Enzymes [BR:
oed01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
125682747
Spliceosome [BR:
oed03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
125682747
Ribosome biogenesis [BR:
oed03009
]
Eukaryotic type
Pre-60S particles
Helicases
125682747
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_22
PRK
Motif
Other DBs
NCBI-GeneID:
125682747
NCBI-ProteinID:
XP_048779309
LinkDB
All DBs
Position
1:complement(72231662..72260628)
Genome browser
AA seq
745 aa
AA seq
DB search
MADLRKLGFVGTIGEDDEIEVEPESSDSNEDELQTPQRQKKKKKAKKNDNEFNTKFSFTD
QLDPSASFDFDFAIRQAKRKQHATTLDEKIAKVRKQQKRGDEPEVIAGESEEDEIEEDDE
SSDEEMRTDTVKTKEKKKKKSKKKKSYSDSEEEKEKEKVEFSETVDSYDEKLTFQDMNVS
RPLMKGLGHMNFSKPTPIQAATIPVALLGRDLCACAVTGSGKTVAFMLPILERLMYRTQQ
VAATRVLVLVPTRELAVQVHTVARQLAQFTNIDIVLSAGGLDVKAQEAALRMNPDVVIAT
PGRLIDHLHNSPNFSLRNIEILVLDEADRMLDEYFAEQMNEIIRQCARTRQTMLFSATMT
EAVQDLASVSLKQPVKIFVNQNTDVALGLRQEFIRIRANREGEREAIIASLVSRTFRDHC
IVFIQTKKQAHRMHIVLGLLGVNVGELHGNLSQAQRLETLKRFKESAVDVLLATDLAARG
LDIEGVKTVINFTMPNTIKHYVHRVGRTARAGRRGRSVTLVGEQERKLLKEVVKKARTPL
KTRIVPQEVISKYRDKINKLEKDIAEIEQQEKEESYLRATENQMNKAKNLLEKDKNGMDD
QKRIWFQSHKERMQEKEALRLGEFNKLPKHRKTSSKEKKKAITAEDRVNHEIQKSQEYAI
RNSKKSFKQKKIRVFKEEDLSTNKLQNKGGKKRKSAFDQELTNTGKNAIKKFRSGPSFKE
KKELGLLGKKRGKKSTGPKTGKKRR
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atggcggatttgaggaaactcgggttcgtagggactatcggagaagacgatgaaatagaa
gtcgagccagagagttctgatagcaatgaagatgaactacagacacctcaaagacaaaag
aaaaagaaaaaggcaaagaaaaatgataacgaatttaacacaaagttcagttttactgat
cagcttgatccttcagccagctttgactttgattttgccatccggcaagctaaaagaaag
cagcatgcaaccactttagatgaaaagattgccaaagttagaaagcaacagaaaagggga
gacgaaccagaagtgatagctggagagagtgaggaagatgaaatcgaggaagatgatgaa
tcttcagatgaggaaatgaggacagacactgtcaaaacaaaggaaaagaaaaagaaaaaa
agcaagaagaaaaaatcgtactcagacagtgaggaggaaaaggaaaaagaaaaagtggag
ttttcagaaactgtggattcctatgatgagaagttaacatttcaggacatgaatgtttct
cgtccactcatgaagggcctgggtcatatgaacttttctaagcccacaccaatccaggct
gcgaccattccagtagctcttctcggtcgagatctctgtgcctgtgctgtaacgggatca
ggtaaaactgtggcatttatgcttcccattctggaacgcttgatgtaccgaactcaacag
gtagcagcgacgcgagtccttgtgctggtacccaccagagagttggctgttcaagtccac
actgttgcccgacagttagcacaatttaccaacatagacattgtcttatcagctggtgga
ttagatgtaaaagcacaagaagcagccctacgcatgaatccagatgtcgttatagcaact
cctggaagactgattgatcacctgcacaattctccaaacttctctctcagaaatatagaa
attctagtgttagatgaggcagacagaatgttggacgagtactttgcggagcagatgaat
gaaatcatccgtcagtgtgctagaaccaggcagaccatgttgttttctgcgacaatgaca
gaagctgtgcaggacttggcctcagtctccctcaagcagccggtgaaaatttttgtcaac
cagaacacagacgtagcccttggtcttcggcaggagttcatcaggatacgagccaacaga
gagggggaaagggaggcaatcatcgcctcactggtcagccgtaccttcagagaccactgt
attgtgttcatacagacaaagaaacaagcccacaggatgcacattgttctgggcttacta
ggcgtcaatgtgggtgagctccatggcaacctgtcacaggcacagaggttggagacgtta
aaaaggtttaaggagtctgctgtagatgtgttgctagcaacagacttagcagctagagga
ctggacattgaaggagtgaaaactgtgataaactttaccatgcctaacaccataaagcat
tacgtgcacagagtggggcgaaccgccagagcaggacgcagggggagatcagtgacattg
gttggagaacaggaaaggaaattactgaaagaagtagtcaagaaagctagaactcctctg
aaaaccagaatagtaccccaagaggtgatttcaaagtacagagataaaataaacaagtta
gagaaagacatagcggagattgagcagcaggagaaagaggaatcttacttaagggcgaca
gaaaaccagatgaataaagccaagaatctgctggagaaggacaaaaatggaatggacgac
cagaaacgaatctggttccagtctcacaaggagagaatgcaagaaaaggaggcattaaga
ctgggagaatttaacaaattaccaaaacacagaaagacaagtagtaaagagaagaaaaaa
gcaataactgcagaggatagagtgaatcacgaaattcagaagtctcaggaatatgccatc
cgtaacagtaagaagtcgttcaagcagaaaaagattcgagtattcaaagaggaggatcta
agtaccaataaactgcagaataagggaggcaaaaagaggaagtctgcttttgatcaagaa
ctgacaaataccggaaagaatgccattaaaaagttcagatctggaccatctttcaaagaa
aagaaggaacttggattattaggaaagaagagaggcaaaaaatccacaggacccaaaaca
ggaaaaaagaggaggtga
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