KEGG   Ostrea edulis (European flat oyster): 125682757
Entry
125682757         CDS       T09123                                 
Name
(RefSeq) flap endonuclease 1-like
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
oed  Ostrea edulis (European flat oyster)
Pathway
oed03030  DNA replication
oed03410  Base excision repair
oed03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:oed00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    125682757
   03410 Base excision repair
    125682757
   03450 Non-homologous end-joining
    125682757
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:oed03032]
    125682757
   03400 DNA repair and recombination proteins [BR:oed03400]
    125682757
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:oed04147]
    125682757
DNA replication proteins [BR:oed03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    125682757
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     125682757
DNA repair and recombination proteins [BR:oed03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     125682757
Exosome [BR:oed04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   125682757
SSDB
Motif
Pfam: XPG_N XPG_I 5_3_exonuc 5_3_exonuc_N XPG_I_2 RPA_interact_C EMC3_TMCO1
Other DBs
NCBI-GeneID: 125682757
NCBI-ProteinID: XP_048779319
LinkDB
Position
1:72260751..72275076
AA seq 376 aa
MGILGLSKLLGDYAPSAMKENEFKNYFGRKVAVDASMCIYQFLIAVRQDGSNLMSEDGET
TSHLMGMFYRTIRMVENGMKPVYVFDGKPPEMKSGELAKRKERREEAQKQLEKAEEAGDE
ENIEKFNRRLVKVSKQHNEECKELLKFMGIPYINAPGEAEAQCAALVKTGKVFATGTEDM
DALTFGTTVLLRNLTVAEARKLPIKEYYYNRVLEELGLNKDEFIDLCILLGCDYCDSIRG
IGPKRAIDLIKQHKNIEEILKHLDSKKYTVPEDWMFKEARKLFQEPDVTDPEELELKWSE
PDEEGLIDFMVNQKNFSEDRIRNGIKKLQKAKQGTTQGRLDSFFSIVSTSTTKRKQAEQK
GSAKKKAKGGGFKRPK
NT seq 1131 nt   +upstreamnt  +downstreamnt
atggggattcttggtttatcaaaattactgggtgattatgccccatccgccatgaaagaa
aatgaattcaagaattattttggccgaaaagtagctgtcgatgcatccatgtgtatatac
cagttcctgattgctgtaagacaagatgggagcaacttaatgagtgaagatggagagact
acaagtcatttgatgggaatgttctacagaactatccgtatggtggagaatggtatgaaa
ccagtgtatgtatttgatggtaaacccccagaaatgaaatcaggtgagcttgccaagcga
aaggaaagaagagaagaggctcagaaacagctggaaaaagcagaagaagcaggtgatgaa
gagaacatagaaaaatttaatagaagactggtaaaagtttcaaagcagcacaatgaagaa
tgtaaagaattgctgaagtttatgggaattccttatatcaatgctccaggtgaagcagag
gctcaatgtgctgccctggtaaaaacgggtaaagttttcgccacagggacggaagacatg
gatgccttgacatttggtaccactgttctgttgcggaatctgactgttgctgaagctagg
aagttaccaattaaagagtactactacaacagagttttagaggagttggggttaaacaaa
gatgagtttattgatctgtgcattttgctgggctgtgattactgcgattctatcagagga
attggtccaaagagagccattgatctaattaaacaacacaaaaatattgaggaaattctg
aaacatctcgactcgaagaaatacactgttcctgaagactggatgttcaaagaggccagg
aaattgtttcaggaaccagatgtaacagaccccgaagaactggagttaaaatggtcagaa
ccagatgaggagggacttattgacttcatggttaatcagaaaaatttcagtgaagaccgg
atcagaaatggaataaagaaattacagaaagccaaacagggaacaacacaaggaaggcta
gattcgttcttctctattgtgtccacatcaacaacaaagagaaagcaagctgaacaaaaa
ggatctgcaaaaaagaaagcaaaaggaggtggattcaaacgccccaaataa

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