Ostrea edulis (European flat oyster): 125683017
Help
Entry
125683017 CDS
T09123
Name
(RefSeq) caprin-1-like isoform X2
KO
K18743
caprin-1
Organism
oed
Ostrea edulis (European flat oyster)
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oed03019
]
125683017
Messenger RNA biogenesis [BR:
oed03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
125683017
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caprin-1_dimer
Motif
Other DBs
NCBI-GeneID:
125683017
NCBI-ProteinID:
XP_048779649
LinkDB
All DBs
Position
6:25475326..25485246
Genome browser
AA seq
613 aa
AA seq
DB search
MPAASTKQETKTSPEAVDPMKQVLIVMDKKVRNLEKRKGKLDGYKEKKDSGMTLEKDQQL
AIDRYGEVVQNLEFARELQKQFTTLAQEAERSIKKQAKKEKVERQNVEVKRTGDILRYQN
LLDAMGAEKVRSDFQTGKHGAVVLTEENLTQLDELYKLLSPSREGETNYTEGLAKASDHF
VNLLDGKDKPVVGTTYKDLKVLIDLIDDCGYFEHAMEEEEGQDSEFVVVNTTEIPKPDSA
EVQASLPPEQTEAIEQSNTATPSNTDAQLESMREADSFFSQKSAAPPQENPPLQQQQQSN
VPYPRQRPFQEIVSEVQGSCIFLQESTIDMESPHMDPAVVAVTSHPMGHPTATQQSDPAQ
ISSQTYTNQGFPQASQQKSVLSQQTVDYSQTFSQTLPSDSLFQSTDSNSSPMSQNVLNQN
VSDSTISQFEMPPQIPMPPGQEERSQDVQAQKFQMNPNAEMFQSKMHSAFPVSDEGQNPD
EFAQHQQDDQQGDYGNGFNSGYRSRGGFRGGRGGRGGDRGGMSNGYGGRGRGNYGGNRGN
YQGYNNRDNYRGENYNSYNNGYQKRGQSRGGPRGAGRGGPRGGFNNKGGSGGGFRSGNNS
GGFGKPPSQQQAA
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgcctgccgcctctacaaaacaagaaactaagacctctccggaggcagtggacccaatg
aagcaggtcctcattgtcatggacaagaaagtccgtaatttggaaaagagaaagggtaaa
ctagatggctacaaggagaagaaggactctggaatgactctggaaaaagaccagcagctg
gccatagatcggtatggagaagtggtgcagaacttggagtttgctagggagctgcagaag
cagttcacaacacttgcccaggaggctgagcgctccatcaagaagcaagccaagaaggag
aaagttgaacgccagaatgtggaagtgaagaggacaggagatattttgagatatcaaaat
ctgcttgatgcgatgggggctgagaaagtcagaagtgattttcagaccggaaaacatggt
gcagtggttttgacagaggagaatttgacccagttagatgaactgtacaagcttcttagt
ccaagccgagagggtgagactaattacacagagggactggctaaggcatctgaccacttt
gtcaatttactagacgggaaagacaaacctgttgtcggtaccacctacaaggaccttaaa
gttctgatcgacttgattgatgactgtggctactttgaacatgctatggaggaggaggaa
ggacaggacagtgaatttgtcgtcgttaacaccacagaaatccccaaacctgactctgca
gaggtgcaggcatctttaccaccagaacaaacagaagccattgaacaaagcaacacagca
actccaagtaacactgatgcacaactagaaagcatgagggaagcagattcttttttctcc
caaaaatcagcggcaccaccccaggaaaatccccctcttcagcaacagcagcaaagtaat
gtaccctatccccggcaacgcccgtttcaagaaatagtgtcggaggttcaaggaagctgc
atcttccttcaagaatctaccatcgacatggaatcaccccatatggacccagcagtcgta
gcagtgacctctcatcccatgggacacccaacagccacacaacaatctgaccctgcccag
atctcctcacaaacatacaccaatcaaggcttcccacaggccagtcagcagaaatcagtt
ttatcacaacaaactgtggactattcacaaacattttcacagacattaccaagtgattca
ctatttcaatccacggacagtaacagttctccaatgtctcagaatgtgttaaatcaaaac
gtcagtgacagcacaatatcacagtttgaaatgcccccacagattcccatgcccccgggc
caggaggagaggtcccaggacgttcaagcacagaagttccagatgaaccctaatgctgaa
atgttccagtccaagatgcattcagcattccctgtttcagacgaggggcagaatccagac
gagtttgctcagcatcaacaggatgatcagcagggagactacggtaatggatttaactca
ggatatcgatctcgtggaggattccgtggtgggcgaggaggtcggggtggtgatcgaggt
ggaatgtcaaatggctatggaggaagaggaaggggcaactatggtggaaaccgagggaac
tatcaaggctacaacaatcgtgataactatcgtggagaaaattataactcctataataat
ggctaccaaaagagaggtcaatccagaggtggtccaaggggagctggacgtggtggtcct
agaggtggattcaacaacaaaggaggaagtggtggaggatttcgcagcggcaacaactct
ggagggtttggaaaacccccctcacagcaacaggcagcttag
DBGET
integrated database retrieval system