Ostrea edulis (European flat oyster): 125683171
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Entry
125683171 CDS
T09123
Name
(RefSeq) U1 small nuclear ribonucleoprotein A-like
KO
K11091
U1 small nuclear ribonucleoprotein A
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125683171
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oed03041
]
125683171
Spliceosome [BR:
oed03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
125683171
Complex B
125683171
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Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
DUF4523
RRM_PARP14_3
xRRM
Motif
Other DBs
NCBI-GeneID:
125683171
NCBI-ProteinID:
XP_048779989
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All DBs
Position
6:complement(42245372..42282175)
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AA seq
234 aa
AA seq
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MDSRPNQTIYINNLNEKVKKDELKKSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKDIN
SANSALRSMQGFPFYEKPMRIQYSKKDSDMIAKMKGTFVERPKRPKEHEPESKKKKKAHK
QAVAAATNAGLPPPTQPSLATAPPQQPAAPTAIPEQPPNQILFLTNLPEETNEMMLSMLF
NQFPGFKEVRLVPGRHDIAFVEFENEVQSGAAKDALQGFKITPSNAMKISYAKK
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atggattccagaccaaaccaaacgatctacataaacaatttgaatgaaaaagttaaaaaa
gatgaactgaagaagtctctttatgccatattttctcagtttggccaaatcctggacatt
gtggctatgaaaacattgaagatgagaggacaagcttttgtaatatttaaggacattaac
agtgccaacagtgcactgcggtcaatgcaagggtttccattttatgaaaaaccaatgaga
atacagtattcaaagaaagattcagatatgattgcaaaaatgaaggggacgtttgtagag
agacccaagaggccaaaggaacacgaaccagaaagtaaaaagaaaaagaaagcccacaag
caggctgttgcagctgctacaaatgctggactacccccaccgacccagccttctttggcg
acagctcctccccagcagcctgctgctccaactgcgatcccagaacaaccacccaatcag
atcctcttcctcactaacttaccagaggaaactaacgaaatgatgttatctatgttattt
aaccagtttccaggattcaaggaagtacgtcttgtacctggtcgccatgatattgcattt
gttgaatttgagaatgaagtccagtcaggtgcagccaaagatgcactacaaggattcaaa
atcactcccagcaatgccatgaagatatcttatgcaaagaagtag
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