Ostrea edulis (European flat oyster): 125683205
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Entry
125683205 CDS
T09123
Name
(RefSeq) deubiquitinating protein VCPIP1-like
KO
K11861
deubiquitinating protein VCIP135 [EC:
3.4.19.12
]
Organism
oed
Ostrea edulis (European flat oyster)
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oed01002
]
125683205
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oed04121
]
125683205
Enzymes [BR:
oed01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
125683205
Peptidases and inhibitors [BR:
oed01002
]
Cysteine peptidases
Family C64
125683205
Ubiquitin system [BR:
oed04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
125683205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VCIP135_N
OTU
DUF1351
OTU1_UBXL
PigL_N
DUF5817
DUF5040
Motif
Other DBs
NCBI-GeneID:
125683205
NCBI-ProteinID:
XP_048780036
LinkDB
All DBs
Position
6:complement(65122940..65166419)
Genome browser
AA seq
1191 aa
AA seq
DB search
MKKSSSSSASESYKVLYGTCPDEQCRAKLYFPSYDKSIECTNCGQRHEKSAIRNIAEVTN
TNVALHNILKNILLGNVKPKKGADNVKVLGLSNYVCKIVSPILTRYGMDKNTGTAKLLTD
LGQPAILDCGKILGDRAFLIEEENLDIIGYGRDKTGSAHYLAETLNVIKEVNNQENRLVP
IHADGDGHCLVHAVSRALVGRELFWHALRVNLMHHLQKNLTTYKDLFRDFIDVDEWDAII
EECDPDFVPQDGEPLGLRNIHVFGLANVLRRPIILMDSISGIQSSGDYSGVFLPGLQSPD
ECRSKDGLLNKPLCIAWSSLGRNHYIPLVGIKGKQQPLLPRYMIQRAWGLPSIQIDKYID
FNKDSCCVIGGNKCLSDKYIRTLVSAMENVYMDKYGVHPQLVADTHQYLYRTLGMVGVRI
EEVLKTTREAVQKKTLYRCLTCEAIMEYQLHDEWFRRGGNLYKLAEQTYGKLRSDKKYSF
PQQGVICSYDKDQDKLIPDLNRCKPSACTYCQGENVRLVRGDGSICFENGDQTKIPAVDS
RCMCGFKHYWDGKEYDNLPEIFPISMEWNGEVVTEKVVWFQYESDVTLNSNVFEVAQKLV
QKHFPGEFGSERLVQRVVDTVLRHTAPKVKDGASSSVVSPYQDTNWSSEESSKIILTGNT
QKTLHKEELTVSQKEKLVKKQIETQAAKQQQKKTKEIAAAASKSNPTTPKPENVQRKESS
PVPMETNRSSSQKKIRVATSDGRQVMLTVEGQVNYVALQNMIYRAVKIPPERQKIRIGFP
PKELKRPSDADINEPIPLAHGDKISLEIIPLTHSVSESGAESSHHEHDALKHSSSLPAKP
KQNWSNFEEDIHTTSFEPLLHSYHEQAGSNSLDAAVASLTIMATLKGRDLWTHVQTMPHL
FSVGGLFYKQVERDLGLVDGKHCTLPTLPGKVFRYNQAESRLELCMEPYGHFQVEPDVEN
KAKETRPIFGSQREMSFSAFSGAVGQDKNKQTAFTGQGHSLKSMPDIERMPEDIPENLHQ
HVRHSHTLCNPNVHQESIAEEPEDPIGGNQEGSMSEERSGGQDYQRIGPGYSIINPSDVN
LTNQSIQEFKDLAESIEKTMNEDISKIDEEMEKLDEEERKSRTSSVSSTQNIQENTADGQ
DGVPSADKDSAQAMTSDETMEIAGSEEGRQPITTAADGESPELCQMDESLQ
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaatcatccagtagttctgcctcagaatcctataaagttttgtatgggacttgt
cctgatgaacaatgccgtgcaaaactctattttccatcttatgataaaagcatcgagtgc
accaactgtggacagcgccatgaaaagtctgccatcagaaacatcgcagaggtgacaaac
acaaatgttgcacttcataacattctgaaaaatattcttctgggaaatgtgaaacccaag
aaaggtgctgacaatgtgaaggtgttgggtctttctaattatgtgtgtaaaatcgtgtcg
ccaattttaacaagatatggtatggataagaacacaggaacagccaaattgctaacagat
cttggccaaccagcaattctggactgtggaaagatcttgggggatagggcttttctgatt
gaagaggagaacctggacattattggttacggaagggacaagacaggcagtgctcattat
ctcgcagagactttgaatgtcattaaagaggtcaacaaccaagaaaacagactggttccc
attcatgcggatggagacggacattgtcttgtacatgctgtatcaagggctttggttgga
cgagaattattttggcatgctctgcgtgtaaacctcatgcaccatttgcagaaaaacctt
acaacgtataaggacctttttcgtgactttattgatgtggatgaatgggatgccatcatt
gaggaatgtgacccggattttgtgccacaggatggggaaccccttggtttgcgaaatatt
catgtgtttggactggcaaatgttctaagaagacccattattttgatggattcaatcagc
ggaattcagagctcaggagattattctggtgtgtttctacctggcctgcagtctcctgat
gagtgtaggagtaaggacggtcttctaaacaaaccgctgtgtatagcctggagcagcttg
gggagaaaccattatattccacttgttgggataaaaggaaaacagcagcctctgttacca
cgctacatgattcagagagcctggggtcttccttcaatccaaatagataagtacatagac
ttcaataaggacagctgttgtgtcatcggaggaaacaagtgtctgtcagataaatacatc
agaactttagtatctgccatggaaaatgtttatatggataagtacggagttcacccccag
cttgtggctgacactcatcagtacctgtatagaacactgggcatggtgggggtacgcatt
gaggaagttctgaagacgaccagggaagccgtacagaaaaagacattgtaccggtgcctg
acgtgtgaagctattatggaatatcagctacatgatgaatggtttaggagagggggcaat
ctgtacaaactggcagagcaaacgtatgggaaactaagatcggacaagaaatattccttt
ccacagcaaggggtcatttgcagttatgataaagatcaggacaaactcataccagaccta
aatcggtgtaaaccaagcgcctgcacttattgtcaaggtgagaatgttcgtctggtgagg
ggggatggtagtatctgttttgagaatggcgaccaaactaaaatccctgctgtggacagt
cgctgtatgtgtggattcaaacattattgggatggcaaggaatatgacaaccttccggaa
attttccccatttccatggagtggaacggagaggtggtgacagaaaaagtagtgtggttc
cagtacgaatcggacgtgactctcaacagcaatgtgttcgaagtggctcagaagttagtt
cagaaacacttcccaggagagtttggtagtgaacgacttgtacagagagtggtagatacc
gtgctgcgacacactgccccaaaagtgaaagacggagcaagttcatcagttgtttcccct
taccaagacaccaactggtcatccgaggaatcgtccaaaatcatactgactggaaatacg
caaaaaactctccacaaagaggagcttactgtgagtcagaaagagaaactggttaaaaag
caaatagaaactcaagctgcaaaacaacagcagaagaaaaccaaggaaatagctgctgca
gcgagcaagtctaaccctactacgcccaagccagagaatgtacagaggaaagagtcgtct
ccagttcctatggaaacaaacaggtcttctagtcaaaagaaaatcagggtggccacatct
gatgggagacaggttatgttgactgtcgaaggacaggtgaactacgtagctctccagaac
atgatttatagagccgtgaaaattcctccagagagacagaaaatccgcatcggatttcct
cccaaggagctaaaacgaccatcagatgctgacattaatgaacctatccctctcgcacat
ggagacaaaatttccctggaaattattccgttgacacattctgtgtcggagtcgggggcg
gagagctctcatcatgaacatgatgctctgaaacattcctcctctctccctgccaaaccc
aaacagaactggagcaactttgaggaagacatacataccacatcatttgagccgttgctt
cacagttaccatgaacaagctggtagtaatagtcttgatgctgcagttgcctcccttaca
attatggcaaccctgaaaggtcgcgacctttggacccatgtgcagaccatgcctcattta
ttttctgtgggcggactgttctacaaacaagttgagcgtgacttggggctggtagatggc
aaacactgcactttacccacactcccaggaaaggtgttcagatacaatcaagcagaaagt
agactggaactttgtatggaaccatatggccattttcaagttgaacctgatgttgaaaat
aaagcaaaggaaactaggccaatttttggctctcagagagaaatgtctttcagtgcattt
agtggtgctgtaggacaagacaagaacaagcagacggcatttacaggtcagggtcattca
ttgaaatcaatgcctgatatcgagagaatgccggaagacatcccagaaaacttacaccaa
catgtccgtcactcacacactctttgtaatccaaacgttcaccaagaatccatcgctgag
gaaccggaggatccgattggaggaaatcaagagggaagtatgagtgaagaaagaagtggt
gggcaggattatcaaagaatagggccaggatatagtattatcaatccatcggatgtgaac
ctgactaatcagtctattcaagagtttaaagatcttgccgagagtatcgaaaaaacaatg
aatgaggacatatcgaaaattgatgaagagatggaaaaactagatgaagaggaaagaaaa
agcagaacatctagtgtcagctccacgcagaacatccaggaaaacacagctgatggacag
gacggtgtacctagtgctgataaagacagcgcacaagctatgacatcagacgaaaccatg
gagatcgcaggaagcgaggaagggagacaacccataacaacggcagcagacggcgaatcg
cctgaattgtgtcagatggatgaatcgctccaataa
DBGET
integrated database retrieval system
