Ostrea edulis (European flat oyster): 125683416
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Entry
125683416 CDS
T09123
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen34-like
KO
K15323
tRNA-splicing endonuclease subunit Sen34 [EC:
4.6.1.16
]
Organism
oed
Ostrea edulis (European flat oyster)
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oed03016
]
125683416
Enzymes [BR:
oed01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
125683416
Transfer RNA biogenesis [BR:
oed03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
125683416
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
DUF6823
Motif
Other DBs
NCBI-GeneID:
125683416
NCBI-ProteinID:
XP_048780508
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Position
6:complement(51730100..51740991)
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AA seq
290 aa
AA seq
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MNELKPIKVYLQNDKPLVWSARDSVELREQWRIVGCLIGCLPRLPRQNNYLGLPLQLSKE
EVTLLLEKGAILLLNNSSDLKQPSVQEKEEFNEYRQKSYQAQVEMFREERKKEIHQNMAN
IIEGKRDKAQKDLEERKSRGEVSEEAEVEEDFSIDVDKVPIPPIPKKFSLVQLFTESPYK
PEDEVPVVWGYPTSEKERLKFGVYRDLWNQGYFLSNGSKFGGDFLVYPGDPSRYHSHYIA
ICIPHEKKMSALDIVSMGRLGSNVRKTVLLCSEGPDNKISYISLQWTGIS
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaattgaagccgatcaaagtatatttacaaaacgacaagccattggtctggagt
gcgagagattctgtagaactgcgagaacagtggagaattgtggggtgtctgatcggatgc
ttgcctcgattacctcgacaaaacaattatctaggtttgccactacagctttcaaaggaa
gaagtcaccctactgttggagaaaggtgccattttgcttctcaataacagcagtgactta
aagcagcccagtgtgcaggagaaagaggagtttaatgaatacagacagaagagctaccaa
gcacaggtagaaatgtttcgagaggaaagaaagaaggaaattcatcagaacatggcaaac
atcatcgagggtaagagagacaaggctcagaaggatttggaggagaggaaaagccgcggt
gaagtttcggaagaagctgaggtggaggaggacttcagcatagacgtagacaaagttcct
atccccccaattccgaagaagttcagtctggttcagttatttacagagtctccatacaaa
ccagaggacgaagtgcccgtcgtctgggggtaccccacatctgaaaaagaacgtctgaag
tttggagtttatcgagacctttggaaccaaggctatttcctgtccaatggcagcaaattt
gggggagactttcttgtttatccaggtgatccttcaagatatcattctcactatattgcc
atctgcattcctcatgagaaaaagatgtctgctcttgacatagtgagtatggggcgtctg
ggatcgaacgtgaggaagactgttttactgtgttctgaaggcccagataacaagatatcc
tacatctcactgcagtggactggtatcagctga
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