Ostrea edulis (European flat oyster): 125683556
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Entry
125683556 CDS
T09123
Name
(RefSeq) contactin-like
Organism
oed
Ostrea edulis (European flat oyster)
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Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
fn3
V-set
Pur_ac_phosph_N
V-set_CD47
Motif
Other DBs
NCBI-GeneID:
125683556
NCBI-ProteinID:
XP_048780790
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Position
6:complement(47117038..47131347)
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AA seq
1094 aa
AA seq
DB search
MAKYDVRWEGDGTKEIMGQSVWVNQEMNKPGRHIVYTYGVYSYLFGRDVASALNPFICEI
SLEESYKIVQDERDFTYGRNTSDPSTAPKGPNFLIQPQSIVVVGKAIAATFECVAHGNPQ
PDYRITKIKEDGSINEITAASDPRYTLTNGKLSIQNPDETSDAGTYYCTAENPQGKVRSD
YLYMSFGRLGEFSNVDRAPVTAYAYQFAIINCIPPTYTPAVSYQWYKDDKQFVRPDLHNY
IFISRNGKLYFSEVSTVDIGNYRCIVKLTANSGSAIGTDQPPSRTSLPTPLNVLNAVPTV
WGPEISNEFISVYPRTPQKGQRVYLECLAFGTMPITYSWSRDGLPMSPRATVTDHNRVLV
IEDVHLEDGGTYVCHASRYTVARAQKNITLFIESKPFFSYPLKHQHVDIGSKLTWRCEAT
AIPEPVYEWFKDGVPLVAVPGKLSIVRNVLTIQNLETSDNGMYQCSAENFYGKSFTEGQL
RVLAFIPTFAKEPLVDKMFGAVGGNITYLCNPEAAPTPTFSWLRNNVDMGLSPGDTTSRI
RMLQNGNLLITNINAGDVGYYTCRVENMFGMTSSTGYLQIADQVVINLPPVNTQVRVNQT
AFLRCQASYSPLQDVIYTWLFNDEIIDTNNLFYKQGESQSLTGLFVMATQFKHSGKYTCR
AQTTREKFESWAVVTVLGPPSEASGVFVVQNTIGSSSMRLSWTVGTSNGAILLFHTVEAQ
PVTSDEWYIAIDYVSDISSIIPGGDSSKRVVEVIGLNPGSGYRFRVYSTNSYGVGPRSRP
SDVYATRNGPPTHPPGYVGGGYGSVGDLTITWMPLEDYQLGGPGIGYFVYYRRNLTQTWT
KVALGGNVGKYVTQVGSDNYYLLYDVMVQPYNSHGEGPNSSVSTIYSAEEIPTVSVANIQ
AYPYNSTALMVTWDQIPDTRESIKGKLLGYQVNYWERFTEDPIMNSISWRGQMSSGLVIG
LLPHTWYTVDVQVLNMAGMGPVSETDFQLTLKVAPRLYPTEVHVASHGSQSVYVTWRGVT
TVVDEEPIQGYILRYWLDGDDIRTASDVRVDRVDNAVLYGIQKNYLYRLRVLGFSTGGDG
TMSELVYFTLGDIL
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaatacgacgtcagatgggagggtgatggaacgaaagagataatgggtcaatcc
gtgtgggtcaatcaggagatgaataaaccaggaaggcacatagtatatacatatggagtg
tactcctatttatttgggcgagacgtggcatcagctctcaatccctttatctgtgagatt
agcctagaagaatcctacaaaatcgtacaagatgaaagggatttcacttacggtcgtaac
acttccgaccctagcactgctccaaaagggcctaatttcctgatacagccccaaagtatc
gtggtggtcggcaaggcaatagcagcaacgttcgaatgcgtagcacatggtaatccccaa
ccagattacagaattaccaaaatcaaggaggatggaagcataaatgaaatcactgctgca
agtgatcctcgatatacgttgacgaacggaaagctctccattcagaatccagatgaaact
agcgatgctggtacctactattgcactgctgaaaatccccaagggaaagtgaggagcgac
tatctttacatgagtttcggaagactcggagaattcagtaacgtggaccgcgcacctgtg
actgcatatgcatatcaattcgccatcattaattgtattccaccaacatacacaccagcc
gtatcgtaccagtggtacaaagacgacaaacaattcgtccggccagaccttcataactat
atcttcatttcccgcaatgggaagctgtatttctccgaagtgtccactgttgatattgga
aactacagatgtatcgtcaaactgacggccaatagtggctccgcgattgggactgaccag
ccaccaagcagaaccagtctaccaacacccctcaatgttctcaacgctgttcccactgtt
tggggtccagaaatttctaatgagttcatttctgtgtatcccagaactccccaaaaaggt
cagagagtatacttggagtgccttgcctttggaacaatgccaataacatacagttggtca
cgtgatggtctcccaatgtcaccaagggcaactgtcacagatcataaccgtgtgttggtc
attgaagatgtccatcttgaagatggcggtacctacgtatgtcacgcttcaagatacacc
gtggcaagagcacagaaaaatatcactttgttcatcgaatcaaagccatttttcagttat
cctctgaaacatcaacatgttgacattggaagcaagttaacgtggagatgcgaagcgacg
gctataccagaaccggtatatgaatggtttaaagacggagtacccttggtcgctgttccg
ggaaagctgagtattgtcagaaatgtattgacgatacagaacctggagacaagcgacaat
gggatgtaccaatgttctgctgaaaatttctatggaaaatcgttcactgaagggcagcta
agagtgttagcatttataccaacatttgcaaaggaacccttggtggacaaaatgtttggt
gccgttggtggcaacatcacttacctctgtaatccggaagccgctccaactcccacattc
tcttggctgaggaacaatgttgatatgggactgagtccaggggataccacgtcacgcatt
cggatgttacagaacgggaacctgttgattaccaacatcaatgctggagacgttggatat
tacacgtgtcgggtagagaacatgttcggaatgacctccagtacaggatatctgcaaata
gcagatcaggttgtaataaatttacccccagtaaatactcaggtcagggtgaaccagaca
gcctttttgagatgtcaagcatcatacagtccactacaagatgtcatctacacatggcta
ttcaatgacgaaataattgacacgaacaatctgttctacaaacagggcgagtcacaatcg
ctgacaggactgtttgtcatggctacacaatttaagcacagcgggaaatacacatgcaga
gcgcagacaacaagagaaaaattcgagtcctgggctgtagtcactgtgctgggtccgccc
agtgaagcgtcaggtgtatttgtggtccaaaacaccattggaagttcctccatgcgattg
tcttggacagtagggacttcaaacggagccattttattatttcacactgtagaagctcaa
cctgtcacgtcagatgagtggtatatagccattgattatgtctcggatatttcatccatc
atacctgggggtgactctagcaaacgcgttgtagaagtcattggattgaatcccggaagt
ggctaccgcttccgtgtatactcaactaacagctacggcgtcggtccgcgcagtagaccc
tctgatgtgtatgcaacaagaaatggaccaccaactcatccaccaggatacgtgggaggt
ggttatggaagtgtgggggatttgactattacttggatgcctttagaagattatcagctc
ggaggacctggcatcggttacttcgtgtactaccgaagaaacttaacacagacgtggact
aaagttgctttggggggaaatgttggaaaatacgtcactcaggttgggtcggacaactat
tatttgctgtatgacgttatggttcagccgtacaattctcacggtgaaggacccaattct
agtgtcagtaccatctactctgcagaggagattccaactgtatcagtcgcaaatatacaa
gcctatccatacaactcgactgcactcatggtgacttgggatcaaatcccagatactcgc
gagtccataaaaggaaagctgctcggatatcaggtgaattattgggagaggtttacagaa
gatcctatcatgaactccatcagttggcgtggtcaaatgagtagcggccttgtgattggt
ctgttgccacacacatggtacactgtcgatgttcaagtactgaatatggcaggaatgggt
ccagtaagcgaaacagattttcagttaacccttaaagtagcaccacgcttataccccaca
gaggtgcatgtagcatcccacggttctcagagtgtttatgtaacatggcgcggagttaca
actgttgtcgatgaagaaccaatccaaggatatattctacggtactggttggacggagat
gacataagaacagcatcggatgttcgtgtggacagggtggacaatgccgttctatacggc
attcagaagaactacctctatcgtttgcgagtactaggcttcagcactggcggggacgga
acgatgagtgaactagtctacttcacactaggtgacattttgtaa
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integrated database retrieval system