Ostrea edulis (European flat oyster): 125683904
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Entry
125683904 CDS
T09123
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
oed
Ostrea edulis (European flat oyster)
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oed03021
]
125683904
Transcription machinery [BR:
oed03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
125683904
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_19
TPR_16
TPR_14
TPR_12
TPR_8
TPR_CcmH_CycH
TPR_17
TPR_10
TPR_11
TPR_7
TPR_6
TPR_Slam
ANAPC3
TPR_9
ARM_TT21_5th
ARM_TT21_4th
TPR_MalT
PknG_TPR
TPR_EMC2
ARM_TT21_C
NatA_aux_su
Peptidase_S41_N
SNAP
Motif
Other DBs
NCBI-GeneID:
125683904
NCBI-ProteinID:
XP_048781398
LinkDB
All DBs
Position
6:complement(59896648..59949947)
Genome browser
AA seq
1178 aa
AA seq
DB search
MSGSIEIPLRDTDEVIELDLDQLPEGEEVLSILRQEVAPLHIWVTLALEYYKQNYVQDFV
KILDASRTDAGLDYPNFERDQMRALDTLAAYYVQKGHKEKNKDKKRELFTQATLLYTTAD
RIIMYDQNHLLGRAYFCLLEGDKMDQADAQFNFVLGQANNNIPSLLGKACIAFNKKDYRG
ALAYYKKALKTNHNCPASVRLGLGHCFVKLNRLEKARMAFERALHLDPQCVGALIGLAIL
ELNSKTQDSIKNGVQLLSKAYTIDSTNPMILNHLANHFFYKKDYQKVQHLALHSFHNTEN
EGMRAESCYQLARAFHVQQDYDQAFQYYYQSTQFAPPNFVLPFFGLGQMYIYRGDNENAA
TCFEKVLKAQSGNYETMKILGSLYANSPEPAKRDVAKQHLKKVTEQFPDDVEAWIELAQI
LEQQDVQGALSAYGTATRILKEKVEADVPPEILNNVAALHFRLGNLQEARKCYEASLERS
RSEAQHDETYYSAISVTTTYNLARLYEATHEYDDAERLYKSILRDHPNYVDCYLRLGCMA
RDRGQIYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERIIGRPNTKDDA
YSLIALGNVWLQTLHTPMRDKDKEKRHQERALAMYKQVLRNDDRNIWAANGIGCVLAHKG
CINEARDVFAQVREATADFCDVWLNIAHIYVEQRQYVAAVQMYENCLKKFFKYHNTEVMV
YLARAYFKCGRLKECKNILLKARHVSPSDTVLLYNIALVQQKLATSILKDEKSNLKTVLS
AVKDLELAIKYFTHLSTYGDRMKFDLNQAASEARQCSDLLSQAQYHVARARKIDEAEREM
RKRQEEEREAIRQKHKAEQMEKQKIKEEMDKKLMEQRAKFVEKAKKISMLEPDADERPRK
SGSKKGKKQDDGDFISDGSSDERPRKKKRRGSDTENDDGEGRRKKKNRKRAQRGGGENSD
DEGGERRSRGKKRKESKVNTERLTEKQRRKIRSKAIISSSEDSDSDGGKKLKIAASSGSE
DEAGEGIGKRRRIMSDSESDAGSRKSGSRSRSRSGSRSRSRSKSGSRRSGSESGASRKSG
SRSRSGSRSRSRSPSGSRSRSRSVSRSRSRSGSPARSGSPARSGSGSPARSRSRSASRSR
SGSPARSGSPGSEGQRSPANSDGGSGNEGGRSGGEESD
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgtctggttcaattgaaatccctcttcgggacaccgatgaggtgattgagttggatctt
gaccagctaccagagggagaagaagtgttgagtatccttcgacaagaagtagcaccgctt
cacatctgggtgactctggcattggaatattacaaacaaaattatgtccaagattttgtc
aagattctggatgcctccaggacagatgcagggttggattatccaaactttgagagagat
cagatgcgagccctggacacacttgctgcatattatgtccagaaagggcataaagaaaag
aataaggataagaaaagggagctgtttacacaggctacccttctatacacgacagctgat
agaatcatcatgtatgaccagaatcacttgctgggtcgtgcctacttctgcctcttggag
ggagacaaaatggaccaggctgatgcacagtttaactttgtgttgggtcaggcaaacaac
aacatcccctcactgctgggtaaggcatgcattgcgttcaataaaaaggactatcgtgga
gcattagcatactacaaaaaagccctgaagaccaaccacaactgtcctgcctccgtcagg
ttggggcttggtcattgttttgtcaaactcaatcgcttggagaaagccagaatggcattt
gagcgagctctgcatttggatccacagtgtgtgggagcattgattggtctggctattcta
gagctgaattctaaaacccaggactccattaaaaacggtgtccagttactgtccaaagca
tacaccatagactccaccaatcccatgattctaaaccatcttgccaaccatttcttctac
aagaaggattatcagaaagtgcaacacctggctcttcactcattccacaacacagagaat
gaaggcatgagagcagaaagctgttatcagctggctagggccttccatgttcagcaagac
tacgatcaggccttccagtattactaccagtcaacacagtttgctcctcctaactttgtc
ctgccgttctttggtctgggccagatgtacatatacaggggtgataacgaaaatgcagcc
acatgttttgagaaggtgctgaaggctcagtcggggaattatgaaacaatgaagattctg
ggttccctttacgcaaattcacctgagcctgctaaaagagatgtagccaaacaacacttg
aagaaggtaacggagcagtttccagatgatgtggaggcgtggattgaactggcacagatt
ctggaacaacaggatgtacagggagcgttgtcagcatatggaacagccactagaattctg
aaagagaaagtggaagctgatgtaccaccagaaattttgaacaatgtggcagctctccat
tttagattgggaaatctgcaagaggccaggaaatgttacgaggcatctcttgaaagatct
cgtagtgaggcccaacatgatgaaacctactatagtgccatttccgtgacaacgacctat
aacctggccaggttgtatgaggcaacacacgagtacgacgatgctgagagactatacaaa
agtattctccgagaccatcctaactacgtggactgttacctgagacttggttgcatggct
cgagacaggggtcagatctacgaggcctcagattggtttaaagaagccctgcagattaat
caggatcacccggatgcttggtctttgataggaaatctgcatttagccaagcaagagtgg
ggtccggggcagaaaaagtttgagcgtatcattggacgacctaacacaaaagacgatgcc
tactctctgattgctttggggaatgtttggctacagactctacacactcccatgagagac
aaggataaggaaaaacgtcatcaggagagagctctggccatgtacaaacaagtcctcaga
aatgatgaccgcaacatctgggcagctaatggaatcgggtgtgttttggcccacaaaggt
tgtatcaatgaggctagagatgtgtttgcccaggtgcgggaggccactgcggatttctgc
gatgtctggctcaatattgcacacatctacgtggaacagaggcagtatgtagcagctgta
caaatgtacgagaattgtttgaagaaattctttaaatatcacaacacggaggtgatggtc
tatctggcgagagcatacttcaaatgtggacgacttaaggagtgcaaaaacattctactc
aaggctcgtcatgtgtctcccagtgacacggtgctgctgtacaacattgccttagtacaa
cagaagctggccacctcaatcctcaaagacgagaagagcaatctaaagacagtactcagt
gccgtcaaagacctagaactggctatcaaatatttcactcatctttcaacatatggagac
agaatgaagtttgatttgaaccaagcagcctcagaagctcgacagtgctcagatcttctc
agtcaagctcagtatcacgtggctcgagctcgcaagattgatgaggcagagagagagatg
agaaagaggcaagaggaggaaagggaggcaatccgtcaaaaacataaggctgaacagatg
gaaaaacagaaaatcaaggaagaaatggataagaagttgatggaacagagagccaagttt
gtggagaaagccaaaaagatatccatgcttgagcctgacgcagacgaaaggccgagaaaa
tcaggatcaaaaaaaggtaaaaagcaagatgatggggactttatatcagacggcagcagt
gatgagagaccgagaaaaaagaagagacgaggatcagacacagagaatgatgatggggag
ggacgcaggaagaagaaaaatagaaaaagagcccagagaggtggaggggaaaattctgat
gatgaaggaggcgagaggcgatcacgggggaaaaagaggaaggagagcaaggtgaataca
gagaggctcacagaaaaacagcgacggaaaatccgatccaaggccatcatctcctccagc
gaggattccgattcagatggaggaaagaaactcaaaattgcggcaagcagtggaagtgag
gatgaagctggtgaaggcattggtaaaagaaggaggataatgtcagacagtgaaagtgat
gctggaagtaggaaatctgggtcaagatcccgtagcaggtcaggttcaagaagcagatct
aggagcaagtctggatcaagaaggtcaggaagtgaatctggtgccagcaggaaatcaggt
tctagatccagatctggatctcgctcccgttccagatcaccctctggatctaggtctagg
tcaaggtcagtatcccgcagcagatccaggagtggctctccagctaggagtggctctcca
gctaggagtggaagtggatcccctgccagatcacgttcaaggtcggcctctagatcccga
tcaggcagtcctgctagaagtggaagtccaggatcagaggggcagaggtcaccagctaat
tcagatggaggaagtggaaatgaaggtggcaggtcaggtggagaggaaagtgattga
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integrated database retrieval system
