Ostrea edulis (European flat oyster): 130050193
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Entry
130050193 CDS
T09123
Name
(RefSeq) F-box/WD repeat-containing protein 1A-like
KO
K03362
F-box and WD-40 domain protein 1/11
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed04120
Ubiquitin mediated proteolysis
oed04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
130050193
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
130050193
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oed04121
]
130050193
03036 Chromosome and associated proteins [BR:
oed03036
]
130050193
Ubiquitin system [BR:
oed04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
130050193
Chromosome and associated proteins [BR:
oed03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
130050193
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
Beta-prop_TEP1_C
WD40_CDC20-Fz
EIF3I
DSE1_N
WD40_MABP1-WDR62_2nd
Beta-TrCP_D
WD40_Gbeta
Beta-prop_EML_2
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML
Beta-prop_WDR41
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_1st
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
F-box-like
PAC11
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
Beta-prop_IP5PC_F
WDR90_beta-prop_4th
ASA1
Beta-prop_VPS8
Beta-prop_Aladin
NBCH_WD40
TRM82_WD
CFAP251_N
Beta-prop_DCAF12
Beta-prop_DCAF4
Beta-prop_IFT140_1st
F-box
Beta-prop_Nup120_160
WD40_RFWD3
WD40_like
Beta-prop_WDR35_TULP_N
Beta-prop_WDR11_2nd
Beta-prop_NOL10_N
Beta-prop_WDR19_1st
WD40_2
KNTC1_N
Beta-prop_WDR75_2nd
Frtz
F-box_5
DUF7899
Motif
Other DBs
NCBI-GeneID:
130050193
NCBI-ProteinID:
XP_056005396
LinkDB
All DBs
Position
9:47240793..47261334
Genome browser
AA seq
524 aa
AA seq
DB search
MTSMETKMETCSSTDDRSDRKLDTDAQIKSLQPAPQKNSEQYLKDRDSCTKYFDNWTEYD
QITFVEHLLSRMCHFQHGQINSFLKPMLQRDFISALPAKGLDHIAENILSYLDAKSLCAA
EGVCKEWYRVISEGMLWKKLIERMVRTDTLWRGLAERRGWGVYLFKGKGGDTPTDHKFYR
NLYPQIIEDIERIETNWRTGRHTLQRIHCRSETSKGVYCLQYDETRIISGLRDNTIKVWK
SKMMWDRNTLECVQVLTGHTGSVLCLQYDDNIIISGSSDSTVRVWDVHTGEMLNTLIHHC
EAVLHLRFCDGIMVTCSKDRSIAVWDMQSPTEINLRRVLVGHRAAVNVVDFDEKYIVSAS
GDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDCLVVSGSSDNTIRLWDIESGACLRTLE
GHEELVRCIRFDNKRIVSGAYDGKIKVWDLAAALDPRSPAGSLCLRTLVEHSGRVFRLQF
DEFQIVSSSHDDTILIWDFLNVPVETTSSSNNRSPTRTYTYVNN
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgacctctatggaaaccaaaatggaaacatgtagttccactgacgatagatctgatcga
aaactggataccgatgcccaaatcaagtctttacagccagctcctcagaagaattcagag
cagtacttaaaggatagagacagttgtaccaaatatttcgacaattggactgaatatgac
caaattacttttgtggaacatttgttatcacgcatgtgtcattttcaacatggacaaatt
aacagtttcttgaaaccgatgttacaaagagatttcatttccgctctcccagcaaaaggt
cttgaccatatagcagaaaacattctctcctacttggatgccaagtcattgtgtgcagct
gagggtgtgtgcaaggaatggtatcgtgtgatctcagagggcatgctatggaagaaactc
atagaaagaatggtacgaacagacaccttgtggcggggcctggctgagagacggggatgg
ggagtgtatttgttcaagggtaaaggaggggacacacccacagaccacaagttttacaga
aatttatatccacaaattatagaagatatcgagaggattgaaacaaactggaggaccggg
cgccacaccctccagcgaattcactgtagaagtgagaccagtaagggtgtgtactgtctt
cagtacgatgagacgaggattatcagcggactgagagacaatacaatcaaagtctggaag
tccaaaatgatgtgggaccgcaacacgttagagtgtgttcaagtattaacagggcacaca
ggttcagttctatgtctacaatacgatgataacatcattatatcagggtccagtgactcc
accgtcagagtctgggatgtacacacgggtgagatgttgaataccttgatccaccactgt
gaagctgttctacacttgagattctgtgatggcattatggtcacttgttcaaaagatcga
agtattgcagtgtgggatatgcagtctccaactgagatcaatttacggcgcgtgttggtt
ggacatcgtgctgctgtaaatgttgtggactttgatgagaaatacattgtttcagcatca
ggggacaggacaatcaaggtctggagtacgtcgacttgtgaatttgtacgcacattaaat
ggacacaagcgtggcatcgcatgtcttcagtaccgagattgtcttgtggtcagtggcagc
tcagacaatacgatcaggttgtgggacatagaaagtggggcatgtcttcgtacacttgaa
gggcatgaggaactggtacggtgtatcagatttgataacaaacgcatagtcagtggagcc
tatgatggtaaaattaaagtgtgggaccttgcagctgctttggatccccgatcgcctgct
ggtagtctctgcttaaggacactagtggagcactctggtcgagtattccgcctacagttt
gacgagttccaaattgtcagtagttctcatgatgacaccattcttatttgggactttcta
aatgtgccagtagaaactacatcctcgtccaataaccgctctccaacgcggacctacact
tacgtgaataattga
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