Ostrea edulis (European flat oyster): 130050355
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Entry
130050355 CDS
T09123
Name
(RefSeq) prominin-1-like
KO
K06532
prominin 1
Organism
oed
Ostrea edulis (European flat oyster)
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oed04147
]
130050355
04090 CD molecules [BR:
oed04090
]
130050355
Exosome [BR:
oed04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
130050355
CD molecules [BR:
oed04090
]
Proteins
130050355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prominin
DUF4407
DUF1664
Baculo_PEP_C
Motif
Other DBs
NCBI-GeneID:
130050355
NCBI-ProteinID:
XP_056006200
LinkDB
All DBs
Position
9:32160684..32200183
Genome browser
AA seq
768 aa
AA seq
DB search
MRSIIWCAFCVWCLCIGPTVGGNGGFTLAPGLASPDYKADEAKYQDGGMGPLYNFARKFI
NMCLSDIEDVIEVIKTAIKGDMSTDPQELLSVVKDNFLGFIISVVVGILFIVIFPIVGCC
FCCCRLSCEACCAQPKEEDPNVSCKKAVYGTILFVIVAFTAAGNICVYVSNDRISLSLTE
LVDNVDTNLDDLELFMDYTTKQIELIRTNFQATKTEINDRLDTSKLSETLQNKAVSLLTG
GAVQELQKDINELTGAITRINNGKTSFTAACNNLNPTPCASTPMNLPTIPNIDISKEATT
SIKNQIDTALGGTTTAIDSAKTQLDQANTQIDDLVTNTKDAIQKGDTVNINGTKTMVKDN
SDFIKPFDKYRWYAGIGCAGIVSLILALYCCGICFGCCGGRSVNDPLEKGCVSNCAGRLM
IGALVFIFVFCPLLMLITTLMYIPGAFLERYICQPLTDPNLQFIDELVNEFESNLETFLK
HETGHEMTLKTFFGNCKNNQAIYKALDLEHLTLFTFKFSDLEMKVQHIMNDMRTKGTQGM
GTMMTDTTGYGGSNLLPQSLQTTLNNVKSAMASFDVNAFDNGLKAMEMLVKSLEPNHPSS
MDIKVMNKALEDMKAGKSQLSKQKLNIPSAVDRVKIQLQNATTTMRTNGMKNIAQSFIND
TVDIVDIYFKDVKFKVHNEIGRCQPLWNLYNSIVKISLCEYIVDAFNGFWFSIGWCIFFL
LPGAVIGTKLSNFLRDVEYTYDNKHDAESGGTKRTKRNQVGHKDDDDD
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgcggtcaataatttggtgtgctttctgtgtgtggtgtttgtgtattggcccgacggtg
gggggaaatggtgggttcacactggcgccgggcctggcttccccggattataaagcggac
gaagctaaataccaggatggaggaatgggaccattgtataattttgcccgaaagttcatc
aatatgtgtttatcagatattgaagatgtgatagaagtgataaagactgcgataaagggt
gacatgagtacagatccacaggaactgctcagcgtggtgaaggacaactttttgggattt
attatttcggtggtggtaggaatcctctttatcgtcatcttccctatcgtggggtgctgc
ttctgttgttgcagactttcctgtgaagcttgttgtgcccaaccaaaggaagaagatcct
aatgtgtcttgcaagaaggctgtttatggaaccatcctcttcgtcatcgtggccttcact
gcagctggcaacatttgtgtgtatgtgtcaaacgacaggatttcgctttctctaacagaa
ctagtagacaatgtggacactaacttagacgaccttgaactgttcatggactacactacc
aagcaaatagagttaattcgtacgaatttccaggcgacaaagactgaaatcaacgacaga
cttgacacatcaaaactttcggagacattacaaaacaaagcggtgtctttattgacagga
ggagctgtacaagagctacagaaagatataaacgaattgactggtgccataaccagaatt
aacaacggaaagacgtcgtttacagcagcgtgcaataacttgaatccaacgccttgtgca
tcaaccccgatgaacttaccaactattccaaatatcgatatatcaaaagaggcaacaacg
agtattaaaaatcagatagatacggccctaggaggcaccactacagcgatagactcggcg
aaaacacaattagaccaagctaacactcagatcgatgacctggtcactaacacaaaggac
gccattcagaagggagacacagtgaacatcaacggaactaaaacaatggtgaaagacaac
tcggatttcatcaaaccatttgataaatatagatggtacgctggtatcggctgtgcaggt
attgtctcccttatccttgctctctactgttgtggaatatgttttggttgttgtggagga
cgatctgttaatgaccctctggaaaaaggttgtgtgtctaactgtgctggacggctaatg
attggggccctcgtgttcatattcgtgttctgtccccttctgatgctcatcaccactttg
atgtacattcctggagcattcctggagaggtacatctgtcagccgctgaccgatcccaac
ctgcagttcatagacgagcttgtcaatgaatttgaatccaatttggagacgtttctcaag
cacgaaacaggccatgaaatgacgctaaagacgttcttcggtaactgtaaaaataatcaa
gcaatctacaaagcattggacctggaacatctaacactttttacattcaagttttccgat
ttggaaatgaaagtacagcatataatgaatgacatgagaaccaagggtacccagggaatg
gggacaatgatgacggatacaacaggatatgggggatccaatctcctgcctcagagccta
caaacgactttgaataatgtgaagagtgcaatggcgtcatttgacgtcaacgcattcgat
aacggtttaaaggccatggagatgttagttaagtctttggaaccaaatcatccgagttcc
atggatatcaaggttatgaataaagctctggaagacatgaaagcaggcaaatctcagctt
tcaaagcagaaattgaatattccgagtgcagtggacagggtgaaaatacagttgcaaaat
gcgacaacaactatgagaacgaatggaatgaaaaatattgctcaatcgtttatcaacgat
acagttgacatcgtcgatatatatttcaaagacgttaaatttaaagtacataatgaaata
ggacgctgccagcccctgtggaatctgtacaactctatcgttaaaatatctctctgtgaa
tacattgtcgatgcttttaatggattctggttttcgattggctggtgcattttcttctta
cttccgggggcagttataggaacaaaactctcaaattttcttcgtgatgttgaatatacg
tatgacaacaaacatgatgctgagagtggaggaaccaaacgcacaaaaaggaaccaagtg
ggacataaggacgatgatgatgactaa
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