Ostrea edulis (European flat oyster): 130052127
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Entry
130052127 CDS
T09123
Name
(RefSeq) patched domain-containing protein 3-like
KO
K24682
patched domain-containing protein
Organism
oed
Ostrea edulis (European flat oyster)
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oed04990
]
130052127
Domain-containing proteins not elsewhere classified [BR:
oed04990
]
Other domain-containing proteins
Patched domain-containing proteins
130052127
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
ACR_tran
NPC1_MLD
DUF6721
Motif
Other DBs
NCBI-GeneID:
130052127
NCBI-ProteinID:
XP_056012203
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All DBs
Position
2:16660479..16673383
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AA seq
956 aa
AA seq
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MACDGSSCCSCCSRCHRKWESFIENAFGRLGSFISSYPVKIMIVCIVVNLLLTIGIMNIE
MENDVETLYTPMDSQAIKDRSVLRGLYGDSTNSSFRSYQLLDFGLYGDVMILSKNKTTIM
SQAYVDEINNINTIIRNTIIVSDSSGQTYTYDDLSAGSNHNEGIASAVVLLNTFQDNFII
PNITYPVYGEYILSPFLAQAVSASGMLNSAIGVKLQYYLRQSETSVVELSKKWEKAFVAK
MENLQTNLTDIAYTSSDSLGTELDKNTNSDIKFFSVTFTLMMTYASIASLTINCNNVANR
MNLGIAGVIAPVLAIASAFGFVSAIGVEFTNIVGVMPFLVVGIGIDDMFILMSGMADAPP
LSEVSIKQRVIFMMQKGAVAITITSLTDLLAFVVGASSVFKSIRNFCIYTGVSVFFCYLN
QLFFLCPAITINEHRTKGSKHFCCSCKTVRPRNEYENKSKCFLLCVPGSPPETRLDVESP
MEKYPKKFILFILNHTIGKFVVVVVFLAYLSSSIYGCVNLQQGLQLFNLVSKDSYYYKYS
VWDENYFTTEPMITLCVTSEQEYHRSETQNLINSVLSKTKLDSYVDDNVEINWLTSYKQS
AHYNAATESNFVSGVKDFLASQSGQSFENDIVFDTSRSKVLSSKFYVKAKNMKTSNEQGD
FMKRMREITENTALPCIIYTPAFVFFEQYVQILPSTLQTLGIAVAAMLVVTFIFMPDLRV
VAIVCITLISILSGILGFMYYWDLTLSSITMIHLVMSVGFSVDFSVHICHAFMSVEGNSR
DTILKNAIDRSGGPVVNAAFSTLLGILMLAFSSSYIFQSFGILMFLVIGFGLIHAAFFLP
LLLYALLPCFHTIQSGRVIDSPIDSRSQRASSGIFWSSFDNANDKKHQETPIDKQKSSMN
GDLPVSQTRPLPRPLPKPNSSRPNSSSQHDENIPQGIVKDIGDGYKMYQPHKNHAS
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atggcatgcgatggaagttcgtgttgttcctgttgttcgagatgtcacagaaaatgggaa
tcttttatagagaatgcattcggcaggctcggttctttcatttcatcatatcccgtgaaa
ataatgatcgtgtgtattgttgtcaacttgcttctgaccattggaatcatgaatatagaa
atggaaaatgatgtggaaacactctatacaccgatggatagtcaagcaataaaagaccgc
tctgtattacgaggcctatacggagactccacgaacagtagttttcgttcttaccaactt
ttagactttggactgtatggcgatgtaatgattctctctaaaaataagactacaataatg
agccaagcctatgttgatgaaataaacaacatcaacactataatcagaaacactataatt
gttagcgattcctctggacaaacctatacttatgatgatctgagtgcaggttcgaatcat
aacgaaggaatcgctagtgctgttgtactattgaatacatttcaagacaatttcataatc
cctaatataacctacccagtttatggggaatatatcttgtcgccctttcttgcgcaggca
gtttctgctagcggaatgttaaattctgcaattggagtaaaattgcagtactatcttcga
caaagtgagacaagtgtagtggaactttcaaagaaatgggaaaaggcttttgttgccaaa
atggagaacctgcaaacaaatctgacagatattgcctacacatcctcagattccctcgga
acagaattggacaaaaacacaaatagcgatataaaatttttctccgttacgtttacgctc
atgatgacatatgcatctattgcttcgttgaccatcaattgcaataatgtagctaatcgt
atgaatttaggaatagcaggtgtcattgcccccgtgttggccatcgcctcagccttcgga
tttgtgagtgcaattggagtggagttcaccaacattgttggtgtaatgccgtttttggtt
gtcgggattggtatagatgatatgttcatcctcatgtccggaatggcggacgccccacct
ctgtctgaagtatccattaaacaaagagtgattttcatgatgcagaagggcgcagttgcc
ataacgattacgtcactgacagatttgctggcttttgtcgttggagcatcgtcggtattc
aaaagtattcggaatttctgcatatacacaggtgtgtcggtgttcttttgctatttaaat
caacttttctttttgtgtccggctataacgattaatgaacatagaacgaaggggagcaaa
catttctgttgttcttgtaaaactgtaagaccgagaaacgaatatgaaaataagtcgaag
tgttttctcttatgtgttcctggatcgccccccgaaacgagacttgatgtggaaagtcca
atggaaaaatatcccaaaaagtttatccttttcattttaaatcatactatcgggaaattt
gtcgtcgttgttgtattcctcgcttacctaagttcttcaatatatggatgtgtaaatctt
caacaaggccttcagctattcaatttagtttcaaaagattcctattactacaagtatagt
gtgtgggacgaaaattatttcaccactgaaccaatgattacgctttgtgtgacttcagaa
caggaataccacaggagtgaaacacaaaatcttataaattctgtgttatccaagactaaa
ttggacagttatgttgatgacaatgttgagataaattggcttacaagttacaagcaatct
gcacattataatgccgccaccgaatcaaattttgttagtggtgtgaaggacttcttggcg
tcacagagtggacaatcctttgaaaacgacattgtttttgatacttctagaagcaaagtg
ctgtcatccaaattttatgttaaggcaaaaaatatgaaaacatcaaatgaacaaggggat
ttcatgaaacgtatgagggaaataacagagaatacggcacttccctgtataatctatacc
ccggctttcgttttcttcgaacaatacgtacaaatcctgcctagcactctccaaactctg
ggtattgcagttgctgcaatgctggtcgtaacgtttatattcatgcccgatttgcgagtc
gttgccatagtatgcatcacacttatcagcatcctgtccggaatattaggttttatgtac
tactgggatctgacattgagctcaataactatgattcatttggtgatgagtgtagggttt
tctgtcgattttagcgtccacatttgccacgccttcatgtctgttgagggaaacagtcgc
gacacaatcctaaaaaacgctattgatagatccggtggccctgttgtaaatgcggctttt
tccacgctattggggatactgatgcttgcattttccagcagctacatttttcaatctttc
ggtatcctgatgtttttggtaattggattcggactgatacatgcggcgttctttcttcct
ttattactatatgcattgttgccctgcttccacactatacagtctgggagagtaatcgat
tcgccaatcgattctagatcccaaagagcttcgtcaggaatattttggtcatcatttgac
aacgccaacgataaaaaacatcaggaaacaccgattgataagcaaaaatcttctatgaat
ggagatctaccggtatctcaaacaaggcctttaccaagacctttaccaaaaccaaactcg
tcgagacctaacagtagttctcaacatgatgaaaacattccacaaggcatagttaaagat
atcggtgatgggtataagatgtaccaacctcacaaaaatcacgcatcttga
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