Ostrea edulis (European flat oyster): 130052325
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Entry
130052325 CDS
T09123
Name
(RefSeq) TBC1 domain family member 13-like isoform X1
KO
K24796
TBC1 domain family member 13
Organism
oed
Ostrea edulis (European flat oyster)
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oed04131
]
130052325
Membrane trafficking [BR:
oed04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
130052325
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Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
Defensin_4
Motif
Other DBs
NCBI-GeneID:
130052325
NCBI-ProteinID:
XP_056012800
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Position
2:65310948..65334278
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AA seq
406 aa
AA seq
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MAAYKARLKAFEDNLNNEKIDLKILRKLCFNGCPYEHGYRSTCWKFVYIIGDISICINFA
GYILLNYLPLDVSQWKEILQKQRKLYTHFVDEMIVEPGTKASAGSQVDDHPLNPNPDSNW
GAFFKDNDMLLQIDKDCRRLCPDLFFFQKATEYPCKEIIHADSRVETLRKRVEHCVLQSE
SLQVDRFGKSNMRATRRKASEEYMLLPDGQEAHWEVVERILFIYAKLNPGQGYVQGMNEI
LGPIYYTFASDPRSECKEFAEADSFFCFTNLMAEIRDIFIKTLDFDVECGIGSMMTKFSD
KLKDKDEFLYNRIQELDLKPQFYAFRWLTLLLSQEFPLPDVLRIWDSLFADENRFNFLIC
ICCAMLMVVRDEILNEDFPTVMKLVQNFQTSKIDLHLILSKAVDIR
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgtacaaggcaagattgaaagctttcgaagacaacttaaacaacgagaaaatt
gacttaaaaattttgaggaagttgtgtttcaatggttgtccttatgaacatggatacaga
tcaacatgttggaaatttgtttatattataggggatatttcaatatgcatcaactttgca
ggttatattttgctgaactatttaccactagatgtctcacaatggaaagaaattcttcaa
aaacaaaggaaactatacacccactttgtagacgagatgatcgtggagcccggaacaaag
gcctcagcaggttctcaagtggatgaccatccactaaacccaaacccagacagtaattgg
ggagctttcttcaaagacaatgatatgttactacagatcgataaggactgtcgtcggtta
tgtccggatctgtttttcttccaaaaagccacggagtacccttgtaaagaaatcattcat
gctgactctcgggtggagacgctgaggaagagagtagagcactgtgttctacagtcagag
agtctgcaggtggacaggttcggcaagtccaacatgagagcgacgaggcggaaggctagc
gaggagtacatgctacttcccgacggtcaggaggcccactgggaagtggtcgagaggata
ctgtttatatacgccaagcttaaccctgggcagggatacgttcagggtatgaatgaaatt
ttaggaccgatctattacacgtttgcctcggatccacggagcgaatgcaaagaatttgca
gaagcagattcctttttctgctttaccaatctgatggcagagattcgagatattttcatt
aagacgctagattttgatgtggaatgtggcatagggagtatgatgactaagttttccgat
aaattgaaggacaaagacgaatttttgtataacagaatacaggaactagatctcaaacca
cagttctatgcattccgatggctgacgcttttgttgtctcaggaatttcctttaccagat
gtactgcgaatatgggattcactatttgcggacgaaaacagattcaattttcttatttgt
atatgctgtgccatgcttatggttgtcagggatgaaatactcaacgaagatttccctact
gtaatgaaactagtacagaacttccaaacgtccaagattgaccttcatctaatactctcc
aaagcagtggacattagataa
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