KEGG   Ostrea edulis (European flat oyster): 130054413
Entry
130054413         CDS       T09123                                 
Name
(RefSeq) splicing factor 3B subunit 4-like isoform X1
  KO
K12831  splicing factor 3B subunit 4
Organism
oed  Ostrea edulis (European flat oyster)
Pathway
oed03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:oed00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    130054413
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:oed03041]
    130054413
Spliceosome [BR:oed03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    130054413
 Complex B
    130054413
 Complex C
   U2 SnRNP specific factors
    130054413
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_5
Other DBs
NCBI-GeneID: 130054413
NCBI-ProteinID: XP_056020085
LinkDB
Position
1:85937621..85955278
AA seq 405 aa
MAAGPIAERNQDATVYVGSLDDKVTEAILWELFLQAGPVVNVHMPKDRVTQSHQGYGFVE
FMGEDDADYAIKIMNMIKLYGKPIRVNKASAHQKNLDVGANIFIGNLDPEVDEKLLYDTF
SAFGVILQTPKIMRDPDTGNSKGYAFINFASFEAADAALEAMNGQFLCNRAISISFAFKK
DSKGERHGSAAERFMAKQNPLSLTDRPHQLFADAPPPPQQPPTQMASSSLAPPPPPPAMG
GMSSMPGMPPGNMPPPMMPMQQPMPPPPMPPSMGMPQFPHQQGQMPYHLPPRPGPPGMPP
GSGSQSQAPPPPPSSQAGSQMPPPPGVPGMGMPPPPPGMRPPPGWRPPPGMRGPPPPMYG
RPPHPGMRPPPPGMRGPPPPPGMNRQAPPPPRQPPPPAPPASRSY
NT seq 1218 nt   +upstreamnt  +downstreamnt
atggctgctggtccgatagcagagcgtaatcaagatgccactgtatatgtgggcagttta
gatgacaaagtcacagaagcaatactatgggaactttttctccaagcagggcctgttgtg
aatgttcacatgccaaaggatcgtgtcacacagtcccaccagggttatggatttgtggag
ttcatgggagaggatgacgcagattatgcaataaagataatgaacatgataaaactgtac
ggcaagccaatcagggtcaacaaggcttcagcccatcagaagaacttggatgttggggcc
aatatatttattggaaacttggatcctgaggtggatgagaaattactttatgacacattc
agtgcatttggggtcatcctccaaacacctaagatcatgcgagaccctgacacgggtaac
tccaagggttatgcattcattaactttgccagttttgaggccgctgatgctgccttggag
gccatgaatggacagttcctgtgtaatagagccatttctatttcatttgccttcaagaag
gactctaaaggagagcggcacggttcagcagcagagagatttatggcgaagcagaaccct
ctttccctaacagaccgccctcatcaactctttgcggatgcccctcccccgccacaacaa
cccccaacgcaaatggcctcttcatctttggctcctcctcctccacctccagccatggga
ggcatgtcatctatgccaggaatgcccccgggaaacatgcctcctccaatgatgcccatg
caacagccaatgcctccccctcccatgcccccatccatgggcatgccacagtttcctcac
cagcaaggtcagatgccatatcatcttcctcctcgtcctgggcctccagggatgcctcct
gggtctggcagtcagtcccaagctccacctcccccaccctcatctcaagcaggatcacag
atgcctcctccccctggtgttccaggaatgggtatgcccccgccaccacctggcatgcgg
ccaccacctggatggagaccgccccctggcatgagaggtccaccacctccaatgtatggc
cgtccaccacatcctggaatgagacctcctccccctggtatgagaggacctccaccccct
ccaggcatgaaccggcaggctcctccccctcctcgacaaccccctcccccagctccgcct
gcctcaagaagttattaa

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