Ostrea edulis (European flat oyster): 130054934
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Entry
130054934 CDS
T09123
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
oed
Ostrea edulis (European flat oyster)
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oed03000
]
130054934
04121 Ubiquitin system [BR:
oed04121
]
130054934
Transcription factors [BR:
oed03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
130054934
Ubiquitin system [BR:
oed04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
130054934
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Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
zf-C2H2_12
Motif
Other DBs
NCBI-GeneID:
130054934
NCBI-ProteinID:
XP_056022020
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Position
5:32441766..32443788
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AA seq
622 aa
AA seq
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MAAKQDFVKLVIPTGAKSAVWDSFGLPVYEKNGVRTTDKSKVICKVCDIQLKYNGNTTNM
MKHLSRHHPSAMLSPTCGGTKSTNIKKENDTDLPRASSSGQLLLTDLKKHTKYSSDSTRA
KALNRKVGVFIAKDLRPLSIVDNKHFREFVTELDPRYSLPTRKHFSDKIIPQLYCETKEK
VLNDIKKADSIALTTDSWTSRMCQSYVTITVHFMLSDWDMQSYVLQTRHLDVSHTGVNIG
QVLREAVREWGLPTETDIPLVTDNASNMDIAAKTADLQPHIGCFAHTVNLACQRGLKVPA
LGRLLGRIRKVVCFFHRSSTATAVLKAKQGQLSLTVHKLVQDVQTRWNSSFDMIQRYLEQ
EPAIHAALSSPEVKKPIKDIVTLSSNDISDAEQIMKVLEPLKTVTNIMCAEHTPTVSLIY
PMKAVILENMSESVHDSNLVRDVKQAIRNDLIKRYSEEDTAEFLLMCAALDPRFMGLPRL
EPDKRDEIYSNIESIVDMSSGSTDGDLCPPPAKKSAIEQLLGDVYIVSVSAAKTIEERVK
SELETYKAKASIPLSSCPLLWWRTSEESFPLLAKLAKRVLGIPSTSVASERVFSTAGDII
TATRSALNPDNVDRLIFLKRNL
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgaagcaggacttcgtcaaattagtaataccaactggcgctaaatctgcggtt
tgggattcattcgggctacccgtttatgagaaaaatggggttcgaaccacagataaatca
aaggtaatctgtaaagtttgtgatattcaactgaaatacaatgggaatacgacgaacatg
atgaagcatcttagcagacatcacccgtctgctatgttgtctccaacatgcggcggaaca
aagtcaaccaacataaaaaaagagaatgacactgatttgccacgagcatcatcatcggga
caattacttttgacagacctgaagaaacacacaaaatattcctcggattcgacccgggct
aaggcattaaacagaaaagttggggtgtttattgccaaggatttgaggcccctgtcaatt
gtcgacaataagcatttccgagagtttgtcacggaattagacccaaggtattctttacct
accagaaagcacttttctgataaaataattcctcagctgtattgtgaaacgaaggaaaaa
gtgttaaatgatattaaaaaagctgactctattgcattaactaccgattcgtggacttct
agaatgtgtcaaagttatgtgaccattactgtacatttcatgctttctgattgggacatg
caatcatatgtgctacagacaagacacttagatgtttctcatactggagtaaacataggt
caggttctccgagaagctgtcagagagtggggattacccacagaaactgatataccactg
gtaacagacaatgcctcaaacatggacatagcggctaaaacagcagatttgcaacctcac
attggatgctttgctcacacagtcaatttggcttgccagaggggtctgaaagtccctgca
cttggtcgtctgcttggcaggattcgcaaggtagtatgcttctttcatcgttcatcaaca
gcaactgctgttcttaaagcaaaacaaggacaattgagtttaactgtgcacaaattagta
caagatgttcagacaaggtggaacagcagctttgatatgatccagagatacctagaacag
gaaccagcaattcatgctgcactctcttctccagaagtgaaaaaacccatcaaagacata
gtaactttgtcttctaatgacatctctgatgcagaacagatcatgaaagttttggaaccc
cttaaaactgtgaccaacataatgtgtgctgaacatacacccacagtgtctctgatatac
ccaatgaaagctgtcattctggagaatatgtcagaaagtgtacatgactcaaatcttgtt
agggatgtaaagcaggctatcagaaatgacctcatcaaacgctacagtgaggaagataca
gctgagtttttactgatgtgtgccgctttggatccacgatttatgggtcttccaaggcta
gagccagacaaacgagatgagatttatagtaacatcgaaagcattgtagatatgtcatca
ggatcaacagatggtgatctctgccctcctcctgccaaaaaatctgctattgagcaactg
ttaggagatgtgtatattgtgtctgtctcagctgcaaaaacaattgaagaaagagtgaaa
tctgaacttgaaacctacaaagccaaagcatctattcccctcagttcatgccctctctta
tggtggcgcaccagtgaagagagtttcccattattggctaaattagcaaagagagtgctg
ggtattccatcaaccagtgtggcaagtgagagggtgttcagcactgctggtgacatcata
actgcaacaagaagtgctctcaatcctgacaatgttgatcgcctcatttttctcaaaaga
aacctttaa
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