Oerskovia sp. KBS0722: FFI11_002405
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Entry
FFI11_002405 CDS
T06124
Name
(GenBank) integration host factor
KO
K03530
DNA-binding protein HU-beta
Organism
oek
Oerskovia sp. KBS0722
Brite
KEGG Orthology (KO) [BR:
oek00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oek03032
]
FFI11_002405
03036 Chromosome and associated proteins [BR:
oek03036
]
FFI11_002405
03400 DNA repair and recombination proteins [BR:
oek03400
]
FFI11_002405
DNA replication proteins [BR:
oek03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
FFI11_002405
Chromosome and associated proteins [BR:
oek03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
FFI11_002405
DNA repair and recombination proteins [BR:
oek03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
FFI11_002405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-DNA_bdg
HU-CCDC81_euk_2
DUF2267
Motif
Other DBs
NCBI-ProteinID:
QDW61523
LinkDB
All DBs
Position
complement(546508..546789)
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AA seq
93 aa
AA seq
DB search
MSLNKSELVSAIAAKSDLTKAQAENALNAFQEVLVESLGKGEAVKVTGLLSVERVERAAR
TGRNPRTGEEIQIPAGFGVKISAGSLLKKAVTK
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctcaacaagtctgagctcgtctcggccatcgccgcaaagtccgacctcaccaag
gctcaggccgagaacgccctcaacgcgttccaggaagtcctcgtcgagtcgctcggcaag
ggcgaggccgtcaaggtcaccggcctcctctccgtcgagcgtgtcgagcgcgccgctcgc
acgggccgcaacccccgcaccggcgaggagattcagatccccgctggcttcggtgtcaag
atcagcgccggcagcctcctgaagaaggccgtcaccaagtga
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