Oerskovia sp. KBS0722: FFI11_004920
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Entry
FFI11_004920 CDS
T06124
Name
(GenBank) hypothetical protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
oek
Oerskovia sp. KBS0722
Pathway
oek03030
DNA replication
oek03430
Mismatch repair
oek03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
oek00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FFI11_004920
03430 Mismatch repair
FFI11_004920
03440 Homologous recombination
FFI11_004920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oek03032
]
FFI11_004920
03400 DNA repair and recombination proteins [BR:
oek03400
]
FFI11_004920
Enzymes [BR:
oek01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FFI11_004920
DNA replication proteins [BR:
oek03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FFI11_004920
DNA repair and recombination proteins [BR:
oek03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FFI11_004920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
TerB
Rv2179c-like
BRCT
PTCB-BRCT
Phage_T7_Capsid
DSBA
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
QDW61959
LinkDB
All DBs
Position
complement(1089440..1090945)
Genome browser
AA seq
501 aa
AA seq
DB search
MPGFAVIDLETTGFSPRQHDRIAEVAVVLTDAAGRVQDEWCTLVNPERDLGPQHVHGISA
ADVGLAPTFALVAPHLARLLEGRVIVAHNASFDTRFLRAEFGRVGLPVGIDPLACLCTMR
LAGTFLPSAPRGLAICCELAGVVHDGAHSALGDARATAGLLEHYLGLDDADPLWAVAHEA
SATHSWPWLPSSGVFAPVLRGASRPTGHWLSGLSDRLDRVPFPPQADDYLALLDLALLDR
YVSFTERGALLAAADEAGLSRAQVESLHHGYLDALARVALTDGVLSDSEVADLHEVAGQL
GMDADDVAAAVARAASGPALGTLPDDGAHLGATPDVLGGAPDAGAHPVAEASGAVGLGTG
RSADDGSAGGADTAVVVASTANGAGTPDAAVVDGESTVLVAATPVAAASAVATVADRPRF
ALARGDEIVLTGAMTRPREDWEREARAAGLAPWPNVTKRTRVVIAADPDSLSGKARTARR
YGIPVVSERVFEELLGLVTVG
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
gtgcccggattcgccgtgatcgacctcgagaccacagggttctcgccccgccagcacgac
cgcatcgccgaggtcgccgtcgtcctcaccgacgccgcgggccgcgtccaggacgagtgg
tgcacgctcgtcaaccccgagcgcgacctgggcccgcagcacgtgcacggcatcagcgcg
gccgacgtcgggctcgcgcccacgttcgccctcgtcgcgccgcacctcgcgcggctcctc
gaagggcgagtgatcgtcgcgcacaacgcgagcttcgacacccggttcctgcgcgcagag
ttcggccgggtcggcctgcccgtggggatcgacccgctcgcgtgcctgtgcaccatgcgc
ctcgccgggacgttcctgccgtcagcgccgcgcgggctcgcgatctgctgcgagctcgcc
ggcgtcgtgcacgacggcgcccactccgccctcggggacgcccgtgccaccgcagggctc
ctcgagcactacctcgggctcgacgacgccgacccgctctgggccgtcgcgcacgaggcg
tccgcgacgcactcgtggccgtggctgccctcttccggggtcttcgcccccgtgctgcgc
ggcgcgagccgcccgaccggccactggctgtccggcctgtccgaccgcctcgaccgcgtc
cccttcccaccccaggccgacgactacctcgcgctcctcgacctcgccctgctcgaccgg
tacgtgtccttcaccgagcgcggcgctctgctcgccgccgccgacgaggccgggctcagc
cgcgcgcaggtcgagtcgctgcaccacgggtacctcgacgcgctcgcgcgggtcgcgctc
acggacggcgtgctctccgacagcgaggtcgccgacctccacgaggtcgctggccagctc
ggcatggacgccgacgacgtcgcggcggcggtcgcgcgcgcggcgtccggtcctgcgctc
ggcaccctgcccgacgacggcgcgcacctgggcgcgacgcctgacgttctcggcggagcg
cccgacgccggagcgcacccggtcgcggaggcgagcggcgccgtcgggctggggactggc
cgcagtgctgacgacgggtcggccggtggtgcggacacggccgtggtggtcgcgtccacc
gcgaacggtgccggtaccccggacgccgcggtcgtcgacggggagtccaccgtgctggtc
gcggcgactccggtcgcggcggcttcggccgtggcgaccgtggccgacaggccgcggttc
gcactggcgcggggcgacgagatcgtgctgaccggggccatgacacggccgcgcgaggac
tgggagcgtgaggcgcgggccgccgggctcgcaccctggccgaacgtcaccaagcgcacc
cgcgtcgtcatcgccgccgacccggactcgctgtccgggaaggcgcgcaccgctcggcga
tacgggatcccggtcgtgagcgagcgggtgttcgaggaactgctggggctggtcacggtc
ggctga
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