Oerskovia sp. KBS0722: FFI11_008820
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Entry
FFI11_008820 CDS
T06124
Name
(GenBank) pseudouridine synthase
KO
K06177
tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:
5.4.99.28
5.4.99.29
]
Organism
oek
Oerskovia sp. KBS0722
Brite
KEGG Orthology (KO) [BR:
oek00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oek03009
]
FFI11_008820
03016 Transfer RNA biogenesis [BR:
oek03016
]
FFI11_008820
Enzymes [BR:
oek01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
FFI11_008820
5.4.99.29 23S rRNA pseudouridine746 synthase
FFI11_008820
Ribosome biogenesis [BR:
oek03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
FFI11_008820
Transfer RNA biogenesis [BR:
oek03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
FFI11_008820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
QDW64568
LinkDB
All DBs
Position
1947684..1948637
Genome browser
AA seq
317 aa
AA seq
DB search
MPFQPLPVRDGLNATRVVLPENGDGSEGGPRWETVLDHLVHRFPDDEPRLREKVAAGEVV
DHLGRPVTAETPFAQHARVFLYRDPPVETRVPFEIEILYQDDDLVVVDKPHFLASIPRGA
FIAESALVRLRRDLGLPELSPAHRLDRVTGGVLVLTVRPEVRGPYQTLFAERRVTKVYEA
VAGVDPGLELPRVVRSRIHKERGVMRAFEVPGEPNSESLVELVDTREVVAGPGQGEPSTL
GLYRLTPHTGKTHQLRLHMNSLGLPILHDNFYPTFYDVRPDDFSRPLQLVARSIEFVDPL
SGKARRFETTRPLQEWS
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atcccgttccagccgctgcccgtgcgggacgggctcaacgcgacgcgcgtcgtcctgccg
gagaacggggacggcagcgaggggggaccccgctgggagaccgtcctcgaccacctggtc
caccgcttccccgacgacgagccgcgcctgcgcgagaaggtcgccgcgggcgaggtcgtc
gaccacctggggcggccggtgaccgcggagacgcccttcgcgcagcacgcgcgcgtgttc
ctctaccgggacccgcccgtcgagacgcgcgtacctttcgagatcgagatcctgtaccag
gacgacgacctggtcgtcgtcgacaagccgcacttcctcgcgagcatcccgcgaggcgcg
ttcatcgcggagtcggcgctcgtgcggctgcgcagggacctggggctgcctgagctctcg
cccgcccaccgcctcgaccgcgtcaccggcggggtcctggtgctgactgtacgacccgag
gtccgcggtccgtaccagacgctcttcgccgagcggcgcgtgaccaaggtctacgaggcc
gtcgcgggcgtcgacccgggtctcgagctcccgcgggtcgtgcgcagccgcatccacaag
gagcgcggcgtcatgcgcgccttcgaggtgcccggcgagccgaactccgagagcctcgtc
gagctcgtggacacccgggaggtcgtggccggccccgggcagggggaacccagcacgctc
ggcctctaccgcctgacgccgcacaccggcaagacccaccagctccggctgcacatgaac
tcgctcggtctgccgatcctgcacgacaacttctacccgacgttctacgacgtgcgcccc
gacgacttcagccgcccgctccagctcgtcgcgcgctcgatcgagttcgtcgacccgctc
agcgggaaggcgcgacggttcgagacgacccgcccactccaggagtggtcctag
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integrated database retrieval system
