Oerskovia sp. KBS0722: FFI11_009280
Help
Entry
FFI11_009280 CDS
T06124
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
oek
Oerskovia sp. KBS0722
Pathway
oek00260
Glycine, serine and threonine metabolism
oek00460
Cyanoamino acid metabolism
oek00630
Glyoxylate and dicarboxylate metabolism
oek00670
One carbon pool by folate
oek00680
Methane metabolism
oek01100
Metabolic pathways
oek01110
Biosynthesis of secondary metabolites
oek01120
Microbial metabolism in diverse environments
oek01200
Carbon metabolism
oek01230
Biosynthesis of amino acids
oek01240
Biosynthesis of cofactors
oek04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
oek00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
FFI11_009280
09102 Energy metabolism
00680 Methane metabolism
FFI11_009280
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
FFI11_009280
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
FFI11_009280
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
FFI11_009280
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
FFI11_009280
Enzymes [BR:
oek01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
FFI11_009280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Beta_elim_lyase
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
QDW62715
LinkDB
All DBs
Position
2061618..2062901
Genome browser
AA seq
427 aa
AA seq
DB search
MSAQPNVLNQSLLEVDPEIAAVLDGELARQRDTLEMIASENFVPRAVLQAQGSVLTNKYA
EGYPGRRYYGGCEQVDIAENLAIARAKSLFGAEHVNVQPHSGATANAAVLHALINKGDKI
LGLELAHGGHLTHGMKINFSGKLYDVSAYGVDPQSYRIEMDEVRKTALETRPDVIIAGWS
AYPRHIDFAAFREIADEVGAKLWVDMAHFAGLVAAGLHPSPVPFADVVSSTVHKTIGGPR
SGFILSKEEYAKKIDSAVFPGQQGGPLMHVVAAKAVSFKIAASDDFKDRQERTLRGASII
ADRLAQPDVAEKGVSVLTGGTDVHLVLVDLRHSELDGQQAEDLLHAVGITVNRNAVPFDP
RPPRVTSGLRIGTPALATRGFGDAEFAEVAEIIAAALKAGAGADVEGLSARVRKLTADFP
LYPGLSQ
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcccagccgaacgtcctgaaccagtccctgctcgaggtggacccggagatcgcc
gcggtcctcgacggggagctcgcgcgccagcgcgacaccctcgagatgatcgcctcggag
aacttcgtgccgcgcgcggtcctgcaggcgcagggctccgtcctcacgaacaagtacgcc
gagggctacccgggccgccgctactacggcggctgcgagcaggtcgacatcgccgagaac
ctcgcgatcgcccgcgccaagtcgctgttcggtgccgagcacgtcaacgtccagccgcac
tcgggcgcgaccgcgaacgcggccgtcctgcacgccctcatcaacaagggcgacaagatc
ctcggcctcgagctggcgcacggcggccacctcacgcacggcatgaagatcaacttctcg
ggcaagctctacgacgtctcggcgtacggcgtcgacccgcagtcgtaccggatcgagatg
gacgaggtccgcaagacggccctggagacccgccccgacgtgatcatcgccggctggtcg
gcgtacccgcgccacatcgacttcgcggcgttccgcgagatcgcggacgaggtcggcgcc
aagctctgggtcgacatggcgcacttcgcgggcctcgtcgccgcgggcctgcacccgtcc
ccggtgcccttcgccgacgtcgtgtcctcgacggtccacaagaccatcggcggcccgcgc
tcgggcttcatcctctccaaggaggagtacgcgaagaagatcgactcggccgtgttcccg
ggccagcagggcggaccgctcatgcacgtcgtggccgcgaaggccgtgtcgttcaagatc
gccgcctcggacgacttcaaggaccgtcaggagcgcacgctgcgcggcgcgagcatcatc
gcggaccgcctggcccagcccgacgtcgccgagaagggcgtctcggtcctcacgggtggc
accgacgtgcacctggtcctcgtggacctgcgtcactccgagctcgacggccagcaggcc
gaggacctcctgcacgccgtgggcatcacggtgaaccgcaacgccgtgccgttcgacccg
cgtcccccgcgcgtcacgtcgggcctgcgcatcggcacgcctgcgctcgcgacccgtggc
ttcggggacgccgagttcgcggaggtcgccgagatcatcgcggctgccctcaaggccggt
gccggcgcggacgtcgagggcctgagtgctcgcgtgcgcaagctgacggccgacttcccg
ctgtacccgggactgtcgcagtaa
DBGET
integrated database retrieval system