Oerskovia sp. KBS0722: FFI11_010645
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Entry
FFI11_010645 CDS
T06124
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
oek
Oerskovia sp. KBS0722
Brite
KEGG Orthology (KO) [BR:
oek00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oek03032
]
FFI11_010645
03400 DNA repair and recombination proteins [BR:
oek03400
]
FFI11_010645
Enzymes [BR:
oek01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
FFI11_010645
DNA replication proteins [BR:
oek03032
]
Prokaryotic type
DNA Topoisomerases
FFI11_010645
DNA repair and recombination proteins [BR:
oek03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FFI11_010645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QDW62925
LinkDB
All DBs
Position
complement(2366091..2367089)
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AA seq
332 aa
AA seq
DB search
MVRLRRVSVSSPGYGRRRHGKGFSYLDVDGSRLSDPDEVARCTRLVVPPAWSDVWICRFP
DGHIQAFGYDDAGRGQYLYHDQWRERRSRRKFDHVLAVGARLPAARRRVAKDLALDGMPQ
AKVLALAFRLLDLAYFRAGSEAYAKQNGSYGLATLRTEHVRVRRDGSVHFRYPAKSGQVR
DVVVEDERVREIVTTLVRRRDAGDLLAWREETPGGLVWHDVTSADVTAYLKERLGEDATA
KDFRTWHATVLAARALADAGAPPASDRARRAVVAGVVRDVADELGNTPAVARSSYIDPRL
VDLWERGQTIDPLLGRGRSQAAAERAVLELLG
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggtccgcctgcgccgcgtctcggtctcctcgcccgggtacggccgacgccgccacggg
aagggcttctcgtacctcgacgtggacggctcgcggctgagcgacccggacgaggtcgca
cgctgcacccgcctggtcgtcccgcccgcctggtcggacgtgtggatctgccggttcccg
gacggccacatccaggccttcgggtacgacgacgcgggacgtggccagtacctgtaccac
gaccagtggcgcgagcgcaggtcccgccgcaagttcgaccacgtcctggcggtcggcgcc
cggctccccgccgcgcgccgccgggtcgccaaggacctcgcgctcgacgggatgccgcag
gccaaggtcctcgcgctcgccttccggctcctggacctcgcgtacttccgggccggcagc
gaggcgtacgcgaagcagaacggcagctacgggctcgcgacgctgcgcaccgagcacgtg
cgcgtgcggcgcgacggctcggtccacttccgctaccccgcgaagtcggggcaggtgcgc
gacgtcgtcgtcgaggacgagcgggtccgcgagatcgtcacgacgctcgtgcggcgtcgg
gacgcgggcgacctgctcgcgtggcgcgaggagacgccgggcggcctcgtctggcacgac
gtgacgagcgcggacgtgaccgcctacctcaaggaacgcctgggcgaggacgctaccgcg
aaggacttccgcacctggcacgccaccgtcctcgccgcccgggccctcgcggacgcgggt
gcaccgcccgcctccgaccgcgcccggcgggccgtggtcgcgggcgtggtccgggacgtc
gccgacgagctcggcaacaccccggccgtcgcgcgctcgtcgtacatcgaccctcgcctg
gtcgacctctgggagcgcgggcagaccatcgacccgctcctgggcagggggcgcagccag
gccgcggccgagcgcgcggtgctggagctgctcgggtga
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