KEGG   Oerskovia sp. KBS0722: FFI11_011100
Entry
FFI11_011100      CDS       T06124                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
oek  Oerskovia sp. KBS0722
Pathway
oek02024  Quorum sensing
oek03060  Protein export
oek03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:oek00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    FFI11_011100
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    FFI11_011100
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    FFI11_011100
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:oek02044]
    FFI11_011100
Enzymes [BR:oek01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     FFI11_011100
Secretion system [BR:oek02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   FFI11_011100
  Eukaryotic Sec-SRP protein
   FFI11_011100
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA nSTAND3 AAA_22 cobW AAA_25 Zeta_toxin ArsA_ATPase MeaB APS_kinase MMR_HSR1 AAA_31 AAA_30 AAA_16 AAA_33 AAA_18 ParA NPHP3_N NACHT nSTAND_NTPase7 TsaE nSTAND_NTPase5 AAA SLFN-g3_helicase ABC_tran Thymidylate_kin NB-ARC
Other DBs
NCBI-ProteinID: QDW62998
LinkDB
Position
2474501..2476123
AA seq 540 aa
MFATLSDRLTSTFKNLRSKGRLSEADIDATIREIRRALLDADVAVPVVKDFTGAIRDRAL
SAEVSGALNPAQQVVKIVNEELVAILGGESRGLRLAKNPPTVIMLAGLQGAGKTTLAGKL
ALHLREQGHTPLLVAADLQRPNAVNQLSVVGERAGVPVYAPLPGNQGSEGESGTSVGDPV
QVARDGVETARQRQHDVVIVDTAGRLGVDAELMRQAADIRDAVNPDEILFVIDAMIGQDA
VATAKAFEEGVDFTGVVLSKLDGDARGGAALSVARVTGRPILFASTGEKLTDFEAFHPDR
MASRILDMGDVLTLIEQAEKAFDADEAAKMAEKVASGQDFTLADFLVQMQQMKNMGSMKK
MLGMLPGMGQMREALDNFDEREVDRIEAIIRSMTPGERDNPKIINGSRRARIARGSGVTT
SDVNQLLDRFAGAQKMMRQMSRGGGMPGMPGMGNLPGMGGKKARGRVAPPPKGRKAKSGN
PAKRAAEEAARQARALGGPVAPPAAPGAAFGALGGAKSAQKSPDPADLQLPPDLEKFLGR
NT seq 1623 nt   +upstreamnt  +downstreamnt
gtgttcgccacgctgtcagatcgattgacgtcgaccttcaagaacctgcggagcaagggc
cgtctctccgaggcggacatcgacgccacgatccgtgagatccggcgcgcgctcctcgac
gcggacgtcgctgtgcccgtcgtcaaggacttcaccggtgccatccgggacagagccctg
tcggccgaggtctccggcgcgctcaaccctgcccagcaggtcgtcaagatcgtcaacgag
gagctcgtcgcgatcctcggcggtgagagccgcggcctgcgcctggcgaagaacccgccg
actgtcatcatgctcgcgggcctccagggcgccggcaagacgaccctggcgggcaagctc
gcgctgcacctgcgcgagcaggggcacaccccgctgctcgtcgcggcggacctccagcgc
cccaacgcggtcaaccagctctcggtcgtgggtgagcgggccggcgtgccggtctacgcc
ccgctgccgggcaaccaggggtcggagggcgagtcgggcacgagcgtcggcgaccctgtc
caggtcgctcgcgacggtgtggagaccgcgcgccagcgccagcacgacgtcgtgatcgtc
gacaccgcaggccgcctcggcgtcgacgccgagctcatgcgtcaggccgcggacatccgc
gacgccgtgaaccccgacgagatcctgttcgtcatcgacgcgatgatcggtcaggacgcc
gtcgcgacggccaaggcgttcgaggagggcgtcgacttcacgggcgtcgtcctgtcgaag
ctcgacggcgacgcccgcggtggtgccgcgttgtcggtcgcgcgcgtcacgggccgtccg
atcctgttcgcgtcgaccggtgagaagctcaccgacttcgaggcgttccaccccgaccgc
atggcgtcgcgcatcctcgacatgggtgacgtgctcacgctcatcgagcaggccgagaag
gcgttcgacgccgacgaggccgcgaagatggccgagaaggtcgccagcggtcaggacttc
acgctcgcggacttcctcgtccagatgcagcagatgaagaacatgggctccatgaagaag
atgctcggcatgctgccgggcatggggcagatgcgtgaggcgctcgacaacttcgacgag
cgcgaggtcgaccgcatcgaggcgatcatccgctcgatgacgccgggtgagcgtgacaac
cccaagatcatcaacgggtcgcgacgtgctcgcatcgcgcgaggatcgggcgtcacgacg
agcgacgtcaaccagctgctcgaccggttcgcgggcgcgcagaagatgatgcgccagatg
agccgtggcggcggcatgcccggcatgcccggcatggggaacctgcccggcatgggaggc
aagaaggcccgcggtcgcgtggcaccgccgcccaaggggcgcaaggcgaagtcgggcaac
ccggccaagcgcgccgcggaggaggctgcccgtcaggcccgtgccctcggtggtcccgtg
gcgcccccggccgcccccggtgcggcgttcggcgccctgggcggtgccaagagcgcgcag
aagtcgcccgacccggccgaccttcagctcccgcccgacctggagaagttcctggggcgc
tag

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