Oerskovia sp. KBS0722: FFI11_011235
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Entry
FFI11_011235 CDS
T06124
Name
(GenBank) Fpg/Nei family DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
oek
Oerskovia sp. KBS0722
Pathway
oek03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
oek00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FFI11_011235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oek03400
]
FFI11_011235
Enzymes [BR:
oek01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
FFI11_011235
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
FFI11_011235
DNA repair and recombination proteins [BR:
oek03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FFI11_011235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Zn_ribbon_TFIIB
NFACT_N
Zn_ribbon_IS1595
Motif
Other DBs
NCBI-ProteinID:
QDW63020
LinkDB
All DBs
Position
complement(2499616..2500533)
Genome browser
AA seq
305 aa
AA seq
DB search
MPELPEVEALVRFLDERVTGRVVVAADLASIVALKTFSPPLSALVGGTVTGAARHGKWLD
LSVRPGVGAGASGVPDGDLHLVFHLARAGWLRWSEDAPTTPVRPTSSRGGVRAVLALRVR
FDDGSGFDLTEAGTRKRLAVHLVLDPAEVPAIATLGVEPLGTDFTRERLAELLGARNQQL
KGVLRDQRLIAGIGNAYSDEILHAARTSPFRLTRSLDADDVAHLHDAVRDVLTEAVATSS
GRPAAELKDAKRRGMRVHGRTGEACPVCGDVVREVSFADRSLQYCATCQTGGQVLADRRM
SKLLK
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgagctgcccgaggtcgaggcgctcgtccgattcctcgacgagcgcgtgaccggt
cgcgtcgtcgtagcggcggacctggcttcgatcgtggccctcaagacgttctctcccccg
ttgtccgcgctggtgggcggcacggtcacgggggccgcgcgccacggcaagtggctggac
ctgtcggtccgcccgggcgtcggcgccggcgcgagcggcgtgcccgacggcgacctccac
ctggtcttccacctcgcccgggccgggtggctgcgctggtccgaggacgcaccgacgacg
cccgtgcggcccacctcgagccgtggcggcgtgcgggccgtgctcgcgctgcgggtccgg
ttcgacgacggctcggggttcgacctcaccgaggcgggcacgcgcaaacggctcgcggtc
cacctggtcctcgaccccgccgaggtgcccgcgatagcgaccctgggcgtcgagcccctc
gggaccgacttcacgcgcgaacgtctggcagagctgctcggcgcgcgcaaccagcagctc
aagggggtcctgcgcgaccagcgtctgatcgccgggatcggcaacgcctactccgacgag
atcctgcacgcggcccggaccagcccgttccgcctgacccgcagcctcgacgccgacgac
gtggcccacctgcacgacgcggtccgggacgtgctcaccgaggccgtcgcgacgtcgtcg
ggcaggcccgcggccgagctcaaggacgccaaacgccgcgggatgcgcgtccacgggcgc
acgggcgaggcctgcccggtgtgcggcgacgtcgtgcgcgaggtgtcgttcgccgaccgc
agcctgcagtactgcgccacgtgccagaccggtggccaggtcctcgcggaccggcgcatg
tcgaagctcctgaagtag
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