Oerskovia sp. KBS0722: FFI11_011755
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Entry
FFI11_011755 CDS
T06124
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
oek
Oerskovia sp. KBS0722
Pathway
oek03030
DNA replication
oek03430
Mismatch repair
oek03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
oek00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FFI11_011755 (dnaE)
03430 Mismatch repair
FFI11_011755 (dnaE)
03440 Homologous recombination
FFI11_011755 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oek03032
]
FFI11_011755 (dnaE)
03400 DNA repair and recombination proteins [BR:
oek03400
]
FFI11_011755 (dnaE)
Enzymes [BR:
oek01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FFI11_011755 (dnaE)
DNA replication proteins [BR:
oek03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FFI11_011755 (dnaE)
DNA repair and recombination proteins [BR:
oek03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FFI11_011755 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
MCM10_OB
HHH_3
Motif
Other DBs
NCBI-ProteinID:
QDW63107
LinkDB
All DBs
Position
2619186..2622743
Genome browser
AA seq
1185 aa
AA seq
DB search
MPSAVTPGSTQKSDDFVHLHVHTEYSMLDGAARLGDLFEETARLGQKAIATTDHGYIFGA
FDFWSKATQAGIKPIIGVEAYVTPGTSRFDQTRVRFGEKGQESDDVSARGAYTHLTMWAR
NNEGLHNLFRASSLASLDGQMGKWPRMDRDLLERYGKGMIASSGCPSGEIQTKLRLGQWD
AAVQAAGELQDVFGKENFYVELMDHGLDIERRVIKDLLRLSETIGAPLVATNDLHYVKKE
DSHSQEALLCINSGSTLADPDRFKFDGDGYYVKSAAEMRHIWKELPEACDNTLLIAEQCE
VSFDTSANYMPNYPCPPGEDETSWFIKEVEKGLHYRYPDGISDAVRKQAEYETQVIVQMG
FPGYFLVVADFINWAKDNGIRVGPGRGSGAGSMAAYAMRITDLDPLQHGLIFERFLNPDR
VSMPDFDVDFDERRRGEVIRYVTEKYGEDRVAQIVTYGTIKAKQALKDSSRLLGFPFAMG
EKLTKAMPPAIMGKDISLTGIFDPDDKRYNEADEFRQIHSADPDAQRVVELAKGIEGLKR
QWGVHAAGVIMSSEPLIDIIPIMRRLQDGAVITQFDYPTCEGLGLIKMDFLGLRNLTILD
DALENIVMNGKDPVELEALTLDDPKTYELLGRGDTLGVFQLDGGGMRTLLKLMRPDNFED
ISAVGALYRPGPMGANSHTNYALRKNGMQEVTPIHPELEEALEDILGTTYGLIVYQEQVM
AIAQKVAGYSLGQADILRRAMGKKKKSELDKQFEGFSNGMKERGFSMAAVKTLWDILLPF
SDYAFNKAHSAAYGVVSYWTAYLKANYPTEYMAALLTSVRDDKDKSALYLNECRRMGITV
LPPDVNSSSANFTAVGKDIRFGLTAVRNVGANVVDAIVATREDKGTFASFTDFLDKVPAV
VCNKRTIESLIKAGAFDSLDHARRALLVVHEQAVDSVISVKREEAKGQFDLFADLGGEDP
AMSFSVDVPDIPDWDKKQRLAFEREMLGLYVSDHPLSGLEHVLTRAADTSIAALMADEAR
PDGSTVVIAGLITSLQRKMSKNGNPWAAVTIEDLEGGVEVMFFGETYLAYSTILAEDQVV
VLRGRVRRRDETMQLQAMEVSLPDISTVAETPVLVSLPESRCTQPVVEKLREILSTHPGV
TEVHLKLTSPGRTKVMRLEDTLRVAKSPALYGDLKALLGPTCLTV
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atgccgtctgccgtcacccctggaagcacccagaagtccgacgacttcgtccacctccac
gtccacaccgagtactcgatgctggacggcgccgcgcggctcggagacctcttcgaggag
accgcgcgactggggcagaaggccatcgcgaccacggaccacgggtacatcttcggggcg
ttcgacttctggtccaaggcgacccaggcgggcatcaagcccatcatcggcgtcgaggcg
tacgtcacgcccggcacgagccgtttcgaccagacgcgcgtgcgcttcggcgagaagggc
caggagtccgacgacgtctcggcccgtggcgcgtacacgcacctgacgatgtgggcccgc
aacaacgagggccttcacaacctcttccgcgcgagctcgctcgcgtcgctcgacggccag
atgggcaagtggccccgcatggaccgtgacctgctcgagcgctacggcaagggcatgatc
gcgtcctcgggctgcccgtcgggcgagatccagaccaagctgcgcctcggccagtgggac
gcggccgtgcaggccgccggcgagctccaggacgtgttcggcaaggagaacttctacgtc
gagctcatggaccacgggctcgacatcgaacgccgcgtcatcaaggacctgctgcgcctc
tcggagaccatcggtgccccgctcgtcgcgacgaacgacctgcactacgtgaagaaggag
gacagccactcccaggaggcgctgctgtgcatcaactccggctccacgctcgcggacccg
gaccgcttcaagttcgacggcgacggctactacgtgaagtccgccgccgagatgcggcac
atctggaaagagctgcccgaggcctgcgacaacacgctgctcatcgccgagcagtgcgag
gtcagcttcgacacctcggccaactacatgcccaactacccctgccccccgggcgaggac
gagacctcctggttcatcaaggaggtcgagaagggcctgcactaccgctacccggacggc
atctcggacgccgtgcgcaagcaggccgagtacgagacccaggtcatcgtccagatgggc
ttcccgggctacttcctcgtcgtcgccgacttcatcaactgggccaaggacaacggcatc
cgcgtgggcccgggacgtggctcgggcgcgggctccatggccgcgtacgcgatgcgcatc
acggacctcgacccgctgcagcacggcctgatcttcgagcgcttcctcaacccggaccgc
gtgtccatgcccgacttcgacgtcgacttcgacgagcgtcgtcgcggcgaggtcatccgc
tacgtcacggagaagtacggcgaggaccgcgtcgcccagatcgtcacctacggcaccatc
aaggccaagcaggccctcaaggactcgtcgcgcctcctgggcttccccttcgcgatgggg
gagaagctcaccaaggccatgccgcccgcgatcatgggcaaggacatctcgctcacgggg
atcttcgaccccgacgacaagcggtacaacgaggccgacgagttccgccagatccactcg
gcggaccccgacgcccagcgcgtcgtcgagctcgccaagggcatcgagggcctgaagcgc
cagtggggcgtgcacgcggccggcgtcatcatgtcgagcgagccgctcatcgacatcatc
ccgatcatgcggcgcctgcaggacggcgcggtcatcacgcagttcgactaccccacgtgc
gagggcctcggcctgatcaagatggacttcctgggtctgcgcaacctcacgatcctcgac
gacgcgctcgagaacatcgtgatgaacggcaaggacccggtcgagctcgaggcgctcacg
ctcgacgaccccaagacgtacgagctcctggggcgcggcgacaccctgggcgtgttccag
ctcgacggcggcggcatgcggaccctgctcaagctcatgcgccccgacaacttcgaggac
atctcggccgtgggcgcgctgtaccgccccggccccatgggcgccaactcgcacaccaac
tacgcgctgcgcaagaacgggatgcaggaggtcactcccatccaccccgagctcgaggag
gccctcgaggacatcctggggaccacgtacggcctgatcgtgtaccaggagcaggtcatg
gccatcgcgcagaaggtcgccggatactcgctcggtcaggccgacatcctgcgccgcgcg
atgggcaagaagaagaagtccgagctggacaagcagttcgagggcttctcaaacggcatg
aaggagcgcggcttctccatggccgcggtcaagacgctgtgggacatcctgctgccgttc
tcggactacgcgttcaacaaggcgcactctgcggcctacggcgtggtgtcctactggacc
gcgtacctcaaggccaactacccgaccgagtacatggccgcgctgctcacgagcgtgcgc
gacgacaaggacaagtcggccctctatctcaacgagtgccgccgcatggggatcacggtc
ctgccgccggacgtgaactcgtcgtcggccaacttcaccgccgtcggcaaggacatccgc
ttcggcctgacggcggtccgcaacgtcggtgcgaacgtcgtggacgcgatcgtcgcgacg
cgcgaggacaaggggacgttcgcgtccttcaccgacttcctcgacaaggtccccgccgtc
gtctgcaacaagcggaccatcgagtcgctcatcaaggccggggcgttcgactcgctcgac
cacgcgcggcgcgccctgctcgtggtccacgagcaggccgtggactcggtcatcagcgtc
aagcgcgaggaggccaaggggcagttcgaccttttcgcggacctcggcggcgaggacccc
gccatgtcgttcagcgtcgacgtgcccgacatccccgactgggacaagaagcagcggctc
gcgttcgagcgcgagatgctcggcctgtacgtctccgaccacccgttgtcggggctcgag
cacgtgctgacccgcgcggccgacacgtcgatcgcggcgctcatggccgacgaggcccgc
cccgacggctcgacggtcgtcatcgccgggctcatcacgtcgctccagcggaagatgagc
aagaacggcaacccgtgggcggcggtgacgatcgaggacctcgagggaggcgtcgaggtc
atgttcttcggcgagacctatctcgcgtactcgacgatcctcgccgaggaccaggtcgtg
gtgctgcgcggacgggtgcgtcgccgcgacgagaccatgcagctccaggccatggaggtc
tcgctccccgacatctcgacggtcgccgagacgccggtgctcgtgagcctgcccgagtct
cgctgcacccagcccgtggtcgagaagctgcgcgagatcctctcgacgcacccgggagtg
accgaggtccacctcaagctcacgagccccgggcggaccaaggtcatgcggctcgaggac
accctgcgggtcgcgaagagcccggcgctgtacggcgacctcaaggcgctgctcggcccg
acgtgcctcacggtgtga
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