Oerskovia sp. KBS0722: FFI11_011880
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Entry
FFI11_011880 CDS
T06124
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
oek
Oerskovia sp. KBS0722
Brite
KEGG Orthology (KO) [BR:
oek00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oek03016
]
FFI11_011880 (thpR)
Enzymes [BR:
oek01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
FFI11_011880 (thpR)
Transfer RNA biogenesis [BR:
oek03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
FFI11_011880 (thpR)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
QDW63126
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All DBs
Position
2643346..2643975
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AA seq
209 aa
AA seq
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MRERSARLFAALYPSDEALDHLGLALSALGAVALDDGRPSLRWTPRDLMHLTVAFLGEVA
EGAADDLAGALDEVARGTEPLSLHLRGAGTFEDRILFAGVGGDAEALRSLSAATAEAASD
VGLRLDRRPRQRAHLTVARASGPRRTGRRRTDPQPTGPGLAELAHALAVYEGPRFTADEL
CLVESTPGAGRSGGPLCEVVRTFGLGEHH
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
gtgagggaacggtcggcgcggctgttcgccgccctgtacccctccgacgaggccctcgac
cacctggggctagcgctctccgccctcggtgcggtcgccctcgacgacgggcggccctcg
ctccggtggaccccgcgtgacctcatgcacctcacggtcgccttcctcggggaggtcgcc
gagggggctgcggacgacctggccggagcgctcgacgaggtcgcacggggcacggaaccg
ctgtcgctgcacctgcgcggtgccgggacgttcgaggaccgcatcctgttcgcgggcgtg
ggcggtgacgcggaagccctgagaagcctgagcgccgcgaccgcggaggcggcctccgac
gtcgggctgcggctcgaccggaggccccgccagcgcgcccacctgaccgtggcgcgcgcc
tccggcccgcgcaggaccggtcgtcgcaggaccgacccgcagccgaccggcccgggactg
gccgagctcgcgcacgccctggccgtctacgaggggccgcggttcaccgcggacgagctc
tgcctcgtcgagtcgaccccgggggcggggcgcagcggcggcccgctgtgcgaggtcgtg
cggaccttcggtctcggcgagcaccactga
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