Oerskovia sp. KBS0722: FFI11_012945
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Entry
FFI11_012945 CDS
T06124
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
oek
Oerskovia sp. KBS0722
Pathway
oek03030
DNA replication
oek03410
Base excision repair
oek03420
Nucleotide excision repair
oek03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
oek00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FFI11_012945 (polA)
03410 Base excision repair
FFI11_012945 (polA)
03420 Nucleotide excision repair
FFI11_012945 (polA)
03440 Homologous recombination
FFI11_012945 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oek03032
]
FFI11_012945 (polA)
03400 DNA repair and recombination proteins [BR:
oek03400
]
FFI11_012945 (polA)
Enzymes [BR:
oek01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FFI11_012945 (polA)
DNA replication proteins [BR:
oek03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
FFI11_012945 (polA)
DNA repair and recombination proteins [BR:
oek03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
FFI11_012945 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FFI11_012945 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
DNA_pol_lambd_f
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QDW64690
LinkDB
All DBs
Position
2882341..2885040
Genome browser
AA seq
899 aa
AA seq
DB search
MADRFALVTTTARPRLLLIDGHSMAYRAYFALPVEKFSTTTGQSTNAVYGFVSMLTNLLR
DEKPTHVAVAFDAGRASFRTEVLPTYKGTRDASPEPFKGQVPLIKDILETLNIPVLQKEN
FEADDIFATLATQAAAVGMEVLICSGDRDSFQLVRDDVTVLYPKVGVSTLARMTPDAVLE
KYGVPPERYPDLAALVGETSDNLPGIPGVGPKTAAKWINAYDGLDGVLASADKITGKAGE
NLRAHLDQVRLNRQLNALLTDMELPLGPDDLLAQPWDREAMHRVFDALEFTALRERLFAL
APEGEEDVEEGFDVSLATLGQGELGGWLTARKERPVGLVVAGKASPVGGDAWSLAVADDG
AAAVAVDLADVAVVDEQALSAWLADADAPKVVHGAKATWHELAVRGFDLQGVVFDTELAA
YLCHPDQRGYDLGDLAIRHLKRELRVEEVDEPQGALDLSLDGSGEDKRDAVRATGVLDLS
EVLVGELRDRGADHLLKDLELPLVDVLARMEARGIAADVEYLTELEKHFGELVATAASEA
YDVIGREVNLGSPKQLQEVLFDQLGMPKTKKIKTGYTTDAAALADLFAKTGHPFLEHLLA
HRDATRLRQTVEGLLKSVAADGRIHTTFQQTIAATGRLSSTDPNLQNIPIRTEAGRRIRR
AFVVGEGYETLLTADYSQIEMRIMAHLSGDEGLIEAFRSGEDLHSYVGSRVFDVPTDQVT
PAMRSKIKAMSYGLAYGLSSFGLSQQLNISVGEAAGLMEDYFKRFGGVRDYLTGVVDEAR
ITGYTATILGRRRYLPDLTSDNRQRRDMAERMALNAPIQGSAADIIKVAMLGVQRALDEQ
DLRSRLLLQVHDELVVEVAPGERDAVEELLRREMGAAAELSVPLDVSVGAGRTWHDAGH
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atagcggataggtttgcactcgtgaccaccactgcgcgacctcgcctcctgctgatcgac
ggacactcgatggcctaccgggcctacttcgccctgccggtcgagaagttctcgacgacc
accggtcagtcgacgaacgccgtctacgggttcgtctcgatgctgacgaacctgctgcgc
gacgagaagccgacgcacgtcgcggtcgcgttcgacgcggggcgcgcgtcgttccgcacc
gaggtcctgccgacgtacaagggcacgcgcgacgcgagccccgagcccttcaagggccag
gtcccgctcatcaaggacatcctcgagacgctcaacatccccgtcctgcagaaggagaac
ttcgaggcggacgacatcttcgcgacgctcgcgacccaggccgcggccgtgggcatggag
gtcctgatctgctcgggcgaccgcgactcgttccagctcgtccgtgacgacgtcacggtg
ctctacccgaaggtgggcgtctcgacgctcgcacgcatgaccccggacgcggtgctcgag
aagtacggcgtcccccccgagcgctacccggacctcgcggccctcgtgggggagacgagc
gacaacctccccgggatcccgggcgtgggtcccaagacggccgccaagtggatcaacgcc
tacgacggcctggacggcgtgctcgcctcggccgacaagatcacgggcaaggcgggggag
aatctgcgggcccatctcgaccaggtccgcctcaaccggcagctcaacgccctgctgacg
gacatggagctcccgctcggtccggacgacctgctggcccagccgtgggaccgcgaggcc
atgcaccgtgtgttcgacgccctggagttcacggccctgcgcgagcgcctgttcgcgctc
gcccccgagggggaggaggacgtcgaggagggcttcgacgtctcgctcgcgacgctcggg
cagggcgagctcggcggctggctcacggcccgcaaggagcgcccggtgggcctcgtggtc
gcgggcaaggcctccccggtgggcggtgacgcgtggtcgctcgcggtggcggacgacggc
gccgcggcggtcgcggtcgatctcgccgacgtcgcggtcgtcgacgagcaggcgctgtcg
gcgtggctcgcggacgccgacgcacccaaggtggtccacggcgccaaggcgacctggcac
gagctcgcggtgcgcggcttcgacctgcagggggtcgtgttcgacaccgagctcgcggcc
tacctgtgtcaccccgaccagcgcggctacgacctgggcgacctcgcgatccggcacctc
aagcgcgagctgcgcgtcgaggaggtcgacgagccccagggcgcgctcgacctgtcgctc
gacggctcgggcgaggacaagagggacgccgtgcgggccaccggcgtcctcgacctctcg
gaggttctggtgggtgagctgcgcgaccgcggcgcggaccacctgctcaaggacctcgag
ctcccgctcgtcgacgtgctcgctcgcatggaggcgcgcggcatcgccgccgacgtcgag
tacctcaccgagctcgagaagcacttcggcgagctcgtggcgaccgccgcctccgaggcc
tacgacgtgatcggccgtgaggtgaacctcggctcgcccaagcagctccaggaggtcctg
ttcgaccagctcggcatgcccaagaccaagaagatcaagaccggctacaccacggacgcc
gcggccctcgcggacttgttcgccaagacggggcacccgttcctcgagcacctgctcgcg
caccgcgacgccacgcgcctgcgtcagacggtcgagggtctgctcaagtcggtcgccgcg
gacgggcgcatccacacgacgttccagcagaccatcgcggcaaccgggcgactgagctcg
acggacccgaacctgcagaacatccccatccgcaccgaggccggccgccgcatccgccgg
gcgttcgtggtcggggagggctacgagaccctgctgaccgccgactacagccagatcgag
atgcgcatcatggcgcacctgtcgggcgacgagggcctcatcgaggcgttccgttcgggc
gaggacctgcacagctatgtgggctcgcgcgtgttcgacgtcccgaccgatcaggtcacc
ccggccatgcgctccaagatcaaggcgatgtcctacggcctggcgtacggcctgtcctcg
ttcggtctctcgcagcagctcaacatctccgtcggggaggccgcgggcctcatggaggac
tacttcaagcgcttcggcggcgtgcgcgactacctcacgggcgtcgtcgacgaagccagg
atcacgggctacaccgcgaccatcctgggccgtcgtcgctacctgcccgacctcacgagc
gacaaccgccagcgccgcgacatggccgagcgtatggcgctcaacgcccccatccagggc
agcgcggccgacatcatcaaggtcgcgatgcttggcgtccagcgcgcgctcgacgagcag
gacctgcgctcgcgcctgctcctgcaggtccacgacgagctcgtggtcgaggtcgccccg
ggggagcgggacgccgtcgaggagcttctgcggcgtgagatgggcgccgcggccgagctc
tcggtcccgctcgacgtctcggtgggcgcagggcgtacctggcacgacgcgggccactga
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