Oerskovia sp. KBS0722: FFI11_014700
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Entry
FFI11_014700 CDS
T06124
Name
(GenBank) DEDD exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
oek
Oerskovia sp. KBS0722
Pathway
oek03030
DNA replication
oek03430
Mismatch repair
oek03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
oek00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FFI11_014700
03430 Mismatch repair
FFI11_014700
03440 Homologous recombination
FFI11_014700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oek03032
]
FFI11_014700
03400 DNA repair and recombination proteins [BR:
oek03400
]
FFI11_014700
Enzymes [BR:
oek01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FFI11_014700
DNA replication proteins [BR:
oek03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FFI11_014700
DNA repair and recombination proteins [BR:
oek03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FFI11_014700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
GIY-YIG
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
QDW63590
LinkDB
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Position
3271057..3272907
Genome browser
AA seq
616 aa
AA seq
DB search
MPSPTAAASAAPPQLSVRSFTPDVVPGGMPVQLGLDELGTPLQDVTFVVVDLETTGGSPA
SAGITEIGAVKVRGGEVLGEFQTLVNPGTPVPAFIARLTGISTAMVATAPPIEAVLPSFL
EFSRGAVLVAHNAPFDIGFLKAAARGAGYDWPGNQVLDTVPLARRVVTRDEAPNHKLSTL
AALFRATVTPEHRALADARATVDVLHALLERLAPFGITHLEDLATATDPVPPDVRRKRTL
ADGLPDAPGVYLFRGPGEEVLYVGTSTSIRRRVRSYFTAAEKRSRMTEMVRIAHAVTPVV
CATVLEAQVRELRLIAEHSPRYNRRSKFPERMSWVRLTREHHPRLSIVQDVQPDAAHIGP
YSSRRQAQQAIDAMHEALPLRQCSPRLPLLPSPGASACALAEMGRCGAPCTTTQEPDGYP
AVVGRARRTLLADPSDVVDPLTARIAALAADERYEQAAEVTARLEAFLLGAGRAQRLGPL
AECAELVAAKPLDLGGWEIVVVRHARLAATGVSAPGTDPWPTIEALVATAEEVAPPVAPA
PACHPHEAELVLGWLEQPGVRLVDVTHPLAWPVRSARAYTDRDRTAQRVARHVEARLDPG
SSNDGPRASDPTEDPC
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgccgtccccgaccgccgcagcctcggccgctcccccgcagctctcggtccgttcgttc
acccctgacgtcgtccccgggggcatgccggtccagctcggcctcgacgagctgggcacc
ccgttgcaggacgtcacgttcgtcgtggtggacctcgagacgacaggtggctcgcccgcc
tcggcggggatcaccgagatcggagccgtcaaggtccgaggaggcgaggtgctcggcgag
ttccagaccctcgtcaaccccggcacgcccgtcccggcgttcatcgcccgcctgaccggg
atcagcaccgcgatggtcgcgaccgcgcccccgatcgaggccgtgctgccctcgttcctc
gagttctcccggggtgcggtcctggtcgcgcacaacgcaccgttcgacatcgggttcctc
aaggcggccgcgcgcggcgcgggctacgactggcccggcaaccaggtcctcgacacggtc
cccctcgcccggcgcgtcgtgacgcgcgacgaggcacccaaccacaagctctcgacgctc
gccgcgctcttccgcgcgaccgtgacccccgagcaccgggcgctggccgacgcgcgcgcc
acggtcgacgtcctgcacgcgctgctcgaacggctcgccccgttcggcatcacgcacctc
gaggacctggcgaccgcgacggacccggtcccgcccgacgtgcggcgcaagcgcactctc
gccgacggcctccctgacgcgccgggcgtctacctgttccgcggtccgggcgaggaggtc
ctgtacgtggggacgtcgacctcgatccgccgccgggtccgcagctacttcacggccgcc
gagaagcgcagccgcatgaccgagatggtgcgcatcgcgcacgccgtgactcctgtcgtg
tgcgcgaccgtgctcgaggcgcaggtccgcgagctgcggctcatcgccgagcactctccc
cgctacaaccgtcgctccaagttccccgagcgcatgagctgggtgcgcctgacgcgcgag
caccaccctcggctctcgatcgtccaggacgtccagcccgacgccgcgcacatcggcccc
tactcgtcgcggagacaggcccagcaggcgatcgacgcgatgcacgaggcgctgcccctg
cgccagtgctcgcctcgcctgcccctgctgccctccccgggggccagcgcgtgcgccctc
gccgagatggggcggtgcggagcgccctgcacgacgacgcaggagcccgacggataccct
gccgtcgtagggcgcgcacggcggactctgctcgcggacccgagcgacgtcgtcgacccg
ctgaccgcgcggatcgccgctctcgccgccgacgagcgctacgagcaggccgccgaggtc
accgcgcgcctcgaggcgttcctgctcggggcgggccgcgcgcaacggctcgggccgctc
gccgagtgcgccgagctcgtcgccgccaagcccctcgacctgggcgggtgggagatcgtc
gtggtgcgccacgcacgcctcgcggcgaccggggtctcggccccggggaccgacccctgg
ccgacgatcgaagcgctcgtcgcgacggccgaggaggtcgcgccgcccgtcgcccccgcg
cccgcatgccacccgcacgaggccgagctcgtcctcggctggctggagcagcccggcgtc
cggctggtcgacgtgacccaccccctcgcgtggcccgtgcgctcggcacgcgcctacacg
gaccgcgaccgcaccgcgcagcgcgtcgcccggcacgtcgaggctagattggaccccggc
tcgtcgaacgacgggccccgcgcctcggacccgacggaggacccatgctga
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