Oerskovia sp. KBS0722: FFI11_015720
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Entry
FFI11_015720 CDS
T06124
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
oek
Oerskovia sp. KBS0722
Pathway
oek03030
DNA replication
oek03430
Mismatch repair
oek03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
oek00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FFI11_015720 (holA)
03430 Mismatch repair
FFI11_015720 (holA)
03440 Homologous recombination
FFI11_015720 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oek03032
]
FFI11_015720 (holA)
03400 DNA repair and recombination proteins [BR:
oek03400
]
FFI11_015720 (holA)
Enzymes [BR:
oek01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FFI11_015720 (holA)
DNA replication proteins [BR:
oek03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FFI11_015720 (holA)
DNA repair and recombination proteins [BR:
oek03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FFI11_015720 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_gamma3
LSDAT_euk
Peripla_BP_4
Motif
Other DBs
NCBI-ProteinID:
QDW63761
LinkDB
All DBs
Position
complement(3493974..3494990)
Genome browser
AA seq
338 aa
AA seq
DB search
MAAAPSRTSARPSATLAWNAVELAPVVLVQGPEGLLAERAVDSLLELARARDPEAEKSEI
EAATYESGMLTVAASPSLFGEPKFVVVRGAEAAADALIPDVVDYVASPDPDTTVVVVHGG
GVRGKKMLDAIRASGAPVVACEAIKKDADKLSFVAAEFKTAGRRADAGAVKALVEALGND
LRELASACAQLVADTTGTISAVTVDRYYGGRVEATGFRVADAAVAGKAGEAVSLLRHALA
TGVDPVPLVAVLAIKLRTLAKVAAMRGRGGVSAKDLGLAPWQIDRAKKDLSSWTPEGLAA
AITAVAQADAEVKGGGRDPVFAVERAVLTIAGAHGSGR
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgctccttcccgcacctctgcccgcccgtccgcgacgctcgcctggaacgcg
gtcgagctcgcgcccgtggtgctggtgcagggccccgaggggctcctcgcggagcgcgcc
gtcgactcgttgctcgagctcgcccgtgcccgcgacccggaggcggagaagtcggagatc
gaggccgcgacctacgagtccggcatgctgacggtcgccgcgagcccgtcgctcttcggt
gaacccaagttcgtggtcgtgcggggtgcggaggcggcggccgacgcgctcatcccggac
gtggtggactacgtggcctcgccagacccggacacgaccgtcgtggtcgtgcacggtggc
ggggtgcggggcaagaagatgctcgacgcgatccgggcgagcggagcccctgtcgtggcg
tgcgaggccatcaagaaggacgccgacaagctctcgttcgtcgccgcggagttcaagacc
gcggggcgtcgggcggacgccggtgcggtcaaggcgctggtcgaggcactcggcaacgac
ctgcgcgagctcgcgagcgcctgcgcccagctcgtcgccgacacgacgggcaccatcagc
gccgtgacggtcgaccggtactacggcggcagggtcgaggccacggggttccgggtcgcc
gacgcggccgtcgcgggcaaggccggcgaggccgtgtcgttgctgcggcacgcactggcg
accggcgtggaccccgtgccgctcgtcgcggtgctcgcgatcaagctccgcacgctcgcc
aaggtcgccgcgatgcgcggccgcggaggagtgtcggccaaggacctgggactcgccccc
tggcagatcgaccgtgcgaagaaggacctgtcgagctggacccccgaagggctggccgcc
gcgatcaccgcggtcgcgcaggcggacgccgaggtcaagggcggtggccgcgacccggtg
ttcgcggtcgagcgcgctgtgctgacgatcgccggggcgcacggctcgggacggtga
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