Oenococcus sp. UCMA 16435: DSM07_00855
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Entry
DSM07_00855 CDS
T05781
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
oen
Oenococcus sp. UCMA 16435
Brite
KEGG Orthology (KO) [BR:
oen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oen03032
]
DSM07_00855
03036 Chromosome and associated proteins [BR:
oen03036
]
DSM07_00855
03400 DNA repair and recombination proteins [BR:
oen03400
]
DSM07_00855
DNA replication proteins [BR:
oen03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
DSM07_00855
Chromosome and associated proteins [BR:
oen03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
DSM07_00855
DNA repair and recombination proteins [BR:
oen03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
DSM07_00855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
DUF2267
Rpf1_C
HU-DNA_bdg
HU-CCDC81_euk_1
Nlig-Ia
Motif
Other DBs
NCBI-ProteinID:
AZZ59980
LinkDB
All DBs
Position
complement(176342..176617)
Genome browser
AA seq
91 aa
AA seq
DB search
MANKQELVDSVAKATDLTKKDATAAVDAVFDSIASYLKKGEKVQLIGFGNFEVRDRAART
GRNPQTGAEIKIPASKVPAFKPGKALKDTVK
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggcaaataagcaagaactagttgattcagttgcaaaggcaactgatctaaccaaaaaa
gatgcaacggctgcagttgacgcagtctttgattcaattgcaagttatttgaaaaaaggc
gaaaaagttcagttgattggctttggtaactttgaagttcgtgatcgcgcagctcgcaca
ggccgtaatccacaaactggtgctgagattaaaatccctgcatcgaaagttccggctttt
aaacctggcaaggccttaaaggacactgttaagtaa
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