Oenococcus sp. UCMA 16435: DSM07_00900
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Entry
DSM07_00900 CDS
T05781
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
oen
Oenococcus sp. UCMA 16435
Pathway
oen03030
DNA replication
oen03430
Mismatch repair
oen03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
oen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DSM07_00900
03430 Mismatch repair
DSM07_00900
03440 Homologous recombination
DSM07_00900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oen03032
]
DSM07_00900
03400 DNA repair and recombination proteins [BR:
oen03400
]
DSM07_00900
Enzymes [BR:
oen01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DSM07_00900
DNA replication proteins [BR:
oen03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DSM07_00900
DNA repair and recombination proteins [BR:
oen03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DSM07_00900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
tRNA_anti-codon
T2SSK
HHH_3
Motif
Other DBs
NCBI-ProteinID:
AZZ59989
LinkDB
All DBs
Position
complement(185135..188017)
Genome browser
AA seq
960 aa
AA seq
DB search
MSYTPLQVFSEYDLLKNPDSTTDLVNALKKRGFQAAVLANHDYLYGVEKFRKAAILANIQ
PIIGLTISNTNHGEVIVVSKNYSGYQNLMKISTHLAFNQNSQFIFEENDLDFSDLALIFQ
DDQRVEIKNSSSFTRGQLGYFPIDWVKTDDSIIASALQHIEKNELNFAGQSEITGEYLKD
ENLYENNLSAETLKNNERFVADIVDDWPKSEKHLPIFPLPSTENNPKKYLSKLVKLGLEN
RFNNRNIPEIYQNRIDRELKTIFQLDLADYFLVVWDIINFARHENIQLGAGRGSAVGSLV
AYALYITTIDPIKYDLYFERFLNPKRVQLPDIDIDVPGNRRQEIVEYLQKKYSLDKFSQI
GTFDTFKRRLAVRDSARIFASSEGTLKRFSRFMAQNNDALEDADPNSLPETIAELPHSSE
IISLAQSISGLPRHVGIHAAGIVLSPEKLVDYVPLNQVSEITVTQFDKDDVEAIGLVKFD
LLRLTNLDMIADIRFLIEQRYGKKINLDNVNLDDKQVLDLFRKLQTNGIFQFESESAKSA
LKQVAVSSFDDVVAVNALNRPGPSENIPIYAQGKRDPNHIEIIDESLQKILLPTYGVIIY
QEQVMQIAQIYAGFTLGEADVFRAAIGHKNEEKLFAQHDAFIKGAVKKGHQQEQAGKIFA
YIERFANYGFNKSHAVAYSKLAFEMAYLKIYFPLEFFSVLLNYDAKNTYLQDIKNKGIKL
LGPDINHAERGFISDNGAIYVGFGKIKGLNRKVIDEIIKERDSRGLFSSLTDFLQRMAGS
DISENDIIQLTYAGSLDHFGYNRQELKTNAGSLITAMGFGGSLLNETKISASKELSLLDR
LAHEKEVLGFTISGHPIDSLRKEIVTKGYTQISDLKADQPVKMAVMIDSIRTTRDKNGNQ
MAFVSISDGTGESSLTVFAREYSQISSILKNGSLIALIGRTQLRNDEINIIANKIQQIGH
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atgagctatacaccattacaagtattcagcgaatacgatttgttaaaaaatcctgattca
acaactgaccttgtgaatgctcttaaaaaaagaggatttcaagcagctgttttagcaaac
catgattatctctacggagttgaaaaattccgtaaagccgcaattttagccaacattcaa
ccaattatcggcttaacgataagcaataccaatcatggtgaagtaattgttgtatcgaaa
aattattctggttatcaaaacttaatgaaaattagcacgcatctggctttcaatcaaaat
tcacagtttattttcgaagaaaatgatttagacttttccgacttagcgctaatatttcaa
gacgatcaacgagtcgaaattaagaattcgagcagctttactcgcggacagttaggttat
ttcccaatcgattgggttaaaactgatgattctattattgcaagtgctctccaacacatt
gaaaaaaatgagttgaattttgccggacaatcagaaatcactggagaatatttaaaagat
gaaaacctttatgaaaataatttatcggcggaaacgttaaaaaacaacgaacgcttcgtt
gccgatatagtggacgattggccgaagagcgaaaaacatttgccaatttttccattaccg
agcacggaaaataatccaaaaaaatatctaagcaaactggttaagctcggtctagaaaat
cgttttaataataggaatattccggaaatttatcagaatcggattgatcgagaactaaag
actattttccaattagatttggcagattattttttggtagtttgggacattatcaatttt
gctcgtcatgaaaatatccaactcggtgccggcagagggtcggcggtcggatcattggtt
gcatatgccttatacataacaactattgacccgattaaatatgatctttatttcgaacgt
tttttgaatccgaagcgggtccagcttcccgatatagatattgatgtgcctggaaacagg
cgccaggaaattgttgaatatctacagaaaaaatattcgcttgataaattttctcaaatt
ggcacctttgatacttttaaaagaagattggctgttcgcgatagcgcaagaatttttgct
agtagcgaaggaactttgaaacgtttttcacgattcatggcacagaacaacgacgcttta
gaagacgctgatccaaacagcttaccggaaactattgcagaacttccacattcttcggaa
attatttccttggcacaatctatttccgggttgcctcgacatgttggaattcatgccgct
ggaattgttttaagcccggaaaaattagtagactatgttcctttgaatcaggtttctgaa
atcactgtcactcagtttgataaggatgatgtcgaagcgattggcttagttaaattcgat
ttactgcgtctaaccaatttggatatgattgcagatattcgttttttgattgaacagcgc
tacgggaagaaaattaatttagacaacgttaatcttgatgacaaacaagttcttgatctg
tttagaaagcttcagactaatggaatttttcaattcgaatcggaatcagcgaaaagtgct
ctaaaacaggttgccgttagcagttttgatgatgtcgtggcagtgaatgctttgaatcgc
ccgggtccatcagaaaatattccaatctatgctcaaggaaaaagagaccctaatcatatt
gagattattgatgaaagtttgcaaaaaatcctcctacctacttatggcgtaattatttat
caagaacaggttatgcagattgcacagatttatgccggtttcactctaggagaggccgat
gtttttcgagcagcgattggacataagaatgaagaaaaattatttgcgcaacatgatgca
tttatcaaaggtgcagttaaaaagggccatcagcaagaacaagcgggaaagatatttgca
tacatcgaacgatttgcaaattatgggtttaacaaaagtcatgccgttgcatacagcaaa
ttagcttttgaaatggcttatttaaaaatctattttccattggaatttttcagcgttcta
cttaattacgacgccaagaacacctatctgcaggatattaaaaataaaggaatcaagctt
ctaggaccagatatcaatcacgcagaacgcggttttataagcgacaacggggctatttat
gttggattcggtaaaataaaaggattaaatcgaaaagtgatcgacgaaattatcaaagaa
agggattcacgcggcttattctccagtttaactgattttcttcaaagaatggctggaagc
gatatcagcgaaaatgatattattcagttgacttatgctggctcgcttgatcattttgga
tataatcgtcaagaattgaaaacgaacgccggttccttaattactgcaatgggatttggc
ggcagccttttaaacgaaacgaagataagtgctagcaaagaattatctttattggatcgt
cttgcacacgaaaaagaggttcttggttttactatctccggccatccgattgatagtttg
agaaaagaaatcgttacaaaaggatacacacagattagtgatttaaaagctgatcaaccg
gttaagatggccgttatgatcgattcgattaggacaactcgtgacaaaaacggtaatcag
atggcttttgtttcgatttccgatggaaccggggagagttctttaacagttttcgctcgt
gagtacagtcaaatatcaagtattttgaaaaatggatcattaatcgctttgattggcaga
actcagttaaggaatgatgaaattaatattattgccaataagatccagcagatcggccat
tga
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