Oenococcus sp. UCMA 16435: DSM07_01465
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Entry
DSM07_01465 CDS
T05781
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
oen
Oenococcus sp. UCMA 16435
Brite
KEGG Orthology (KO) [BR:
oen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oen03019
]
DSM07_01465
Messenger RNA biogenesis [BR:
oen03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DSM07_01465
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GFIT
Motif
Pfam:
HD
TraI_2
tRNA_anti-codon
HDOD
Motif
Other DBs
NCBI-ProteinID:
AZZ60084
LinkDB
All DBs
Position
complement(284907..285875)
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AA seq
322 aa
AA seq
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MLNEHQKGENYSIYLLIKSAEKRMTSKSSPYIRLTLTDRSGEIQANLWDASDDDVANYVP
GKVVYLNVLQDEYQSKPQLKIQEIRLANETEPSDPSLYEISSPVSKKELQSQINDLLFQI
TNPTWNRIVRNVLNKYADKYYEYPAAEKIHHAYRGGLAFHSLSIAKLALAVSDLYPQINR
SLLLAGALLHDIGKTKELSGPVGTEYTTEGQLLGHIVIGDEIIVQAAEELGFDLDSEDML
ILRHLILSHHNKLEFGSPVQPKELEAYVLSKLDDLDSHIQLITTAIDKTSAGDFSEKIFA
ADNQPYYRLKTDLSEKSDQNNN
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgcttaatgaacatcaaaaaggtgaaaattatagtatttatcttttaattaagtcggct
gagaaacgaatgactagcaagagttctccttatattcgtttgactttaactgaccggtcc
ggcgaaattcaagctaatctttgggatgcaagtgatgatgacgttgctaattatgttccg
ggaaaagtcgtttatctaaatgttttgcaggatgaataccaatccaaaccacaattgaaa
attcaagagatcaggttagctaatgaaaccgaaccaagcgatccatctttgtatgaaatt
agctcgccggtctccaaaaaagaattacagtcgcaaattaatgatcttttgtttcaaatt
actaatccaacttggaaccgaattgttcgcaacgttttaaataaatacgctgacaaatat
tatgaatatccggcagctgaaaaaatccatcatgcttatcgtggtggattagcgtttcat
tcactttcaattgctaaattagcgttagcagtttcagatttataccctcagatcaatcga
tcgctgttattggctggtgctttattgcatgatattggtaaaacaaaagaactttcaggt
ccggtcgggacggaatatactaccgaaggacaattacttgggcatattgtaattggcgac
gaaattattgttcaagctgcagaagaacttggttttgatttggattctgaagatatgctt
atattaagacatttgattttgagtcatcataataaactggaattcggttccccggttcaa
ccaaaagaattagaagcttatgttttatcaaaattagatgatcttgactcgcatatacaa
ttgattacaactgctattgacaaaacttctgccggcgatttttcggaaaaaatttttgct
gccgataatcaaccttattatcgtctgaaaactgatttatcagaaaaaagcgatcaaaat
aacaattaa
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