Oenococcus sp. UCMA 16435: DSM07_02560
Help
Entry
DSM07_02560 CDS
T05781
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
oen
Oenococcus sp. UCMA 16435
Pathway
oen03030
DNA replication
oen03410
Base excision repair
oen03420
Nucleotide excision repair
oen03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
oen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DSM07_02560 (polA)
03410 Base excision repair
DSM07_02560 (polA)
03420 Nucleotide excision repair
DSM07_02560 (polA)
03440 Homologous recombination
DSM07_02560 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oen03032
]
DSM07_02560 (polA)
03400 DNA repair and recombination proteins [BR:
oen03400
]
DSM07_02560 (polA)
Enzymes [BR:
oen01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DSM07_02560 (polA)
DNA replication proteins [BR:
oen03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
DSM07_02560 (polA)
DNA repair and recombination proteins [BR:
oen03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
DSM07_02560 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DSM07_02560 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
Taq-exonuc
HHH_2
Motif
Other DBs
NCBI-ProteinID:
AZZ60275
LinkDB
All DBs
Position
complement(495387..498122)
Genome browser
AA seq
911 aa
AA seq
DB search
MPRGGHFCLCLKTTVKIKAMTKTLLLIDGNSLAFRAFYAMYNQLDRMVAHTGLHTNALVA
FNNFFDQVVEKMNPDYALVAWDAGKGATTFRAKIFDDYKGDRQATPPELSEQFPYLRKMV
DLHGIHSYELPGFEADDIIGTYSKIAGQAGFKTTIITGDRDLTQLVTDDVSVNVTKRGVT
ELDRYTPKFLAEKWGGITPSQVIEMKSLTGDNSDHYPGVTKVGEKTAIKLLNEFGSLDGI
YRHIDSMKTSKLKENLLNDKESAYRAHKLATIRTDAPVELKMEELVNQPINFKELIPFYE
ELDFKVQLAKIHSMQKSGMIGQNQEEEKSVRVTELKAANLDHLLEIKNYLTVYFQTDSDN
YHIAKISAFVVGNEDDGYFASRDLELLNSSVLRELFKSDLPKYVFNAKELTVLLNRMGLQ
INNLDFDFLLISYLLDTTDNDNQLATLANRFNVFLESDAEVYGSGVKFKIPENDETLFSH
MANKASTISKLYDPSMKKLSDHKQVELYRQIELPLSKVLASMEINGIKLDQSELKELGQE
FNQRIFELEKQIYEEAGQEFNINSPKQLADLLFAHMKIPPIKKTKTGYSTAASVLEELAE
KYPFVGLILQYRQLAKLNSTYVKGLLEVVNPEDSKIHTRYLQTLTQTGRLSSVDPNMQNI
PDRDEEGKRIRKAFVPSHQGWEIFGADYSQIELRVLAHVTGDENLKNAFESGEDIHAATA
RSIFGLSADQKITFDQRRRAKAVNFGIVYGISDFGLAQRLGISRIEGKEIIQTYFHEFPK
VKTWIDSIIALAHKQGYVETISQRRRYLPDIHSKNFNLRSFAERTATNTPIQGSAADIIK
IAMIKMQRALDDNHLKTKMLLQVHDELIFEAPNQEIDTLEELVPKVMDSAVKLDVPLRVE
AHHGVNWYDEK
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atgcccagaggtgggcatttttgtttgtgcttgaaaacgactgttaaaataaaagcaatg
acaaaaacacttttattaattgatggtaattctttggcttttagagctttttatgctatg
tacaatcagcttgacaggatggtcgctcatactggactgcataccaatgctttggttgct
tttaacaatttttttgatcaggttgttgaaaaaatgaatcctgattacgctctggttgct
tgggatgctggaaaaggagcgacaacttttcgcgctaaaatttttgatgattacaaaggt
gatcggcaggctacaccgccggaattatcagaacaattcccttatttaaggaaaatggtt
gatttgcacggaattcattcttatgaactacccggctttgaggccgatgatattattggt
acctattcaaagattgctggacaggcgggctttaaaacaacaattatcaccggagatcgg
gatttaactcaattagtaaccgacgatgtttctgtgaatgttactaaaagaggcgttacc
gaattggatagatacacgccaaaatttttggcggaaaaatggggtggaattactccgagc
caggttattgaaatgaagtcgctaacaggtgataattccgatcattatcctggcgtcacg
aaagtcggtgaaaaaacggcgattaaattattaaatgaatttggaagtcttgatggaatt
tatcggcatatcgattcaatgaagacttcaaaattaaaggaaaatctcctaaatgataaa
gaatcggcttatcgtgcacataaattagctactattcggacagatgcaccggttgaattg
aaaatggaggaattagttaatcagccaattaatttcaaagaattaattccgttttatgag
gaattggattttaaggtccaattagccaaaattcattcaatgcagaaatctggcatgatt
ggacaaaatcaggaagaagagaaaagtgttcgggtcacggaattaaaggcagccaatctt
gatcatttattagaaattaaaaattatttaaccgtttatttccaaactgattctgacaat
tatcacatcgccaaaatttcagcttttgtagttggaaatgaggatgatggttactttgca
agcagggatcttgagcttttgaattcgtcagtattaagagaattgtttaaaagcgatttg
ccgaaatatgtttttaatgctaaagagttaactgttttgcttaatcgtatgggactgcaa
attaataacttagattttgattttttgctaatctcttatttactagatacaacggataac
gataatcaattagctactttggcaaatcgattcaatgtttttcttgagtcggatgctgaa
gtttatggaagtggggttaagtttaaaatcccggaaaatgatgaaactttattttctcac
atggcaaataaggcttcaacaattagcaaattatatgatccatctatgaaaaaactttcc
gatcataagcaggttgaattatatcgtcaaatagaactgccgttgtcaaaagttttggct
tcgatggaaatcaatggaattaagctcgatcaatcagagctaaaagaacttggtcaggaa
ttcaatcaacgtatttttgaattagagaaacaaatatatgaggaggctggtcaggaattc
aatattaattcaccgaagcaattggccgaccttctcttcgcccatatgaaaataccgccg
atcaagaaaactaaaactggctattcgacggctgctagtgtgcttgaagaattagctgaa
aaatatccttttgttggtttgattttgcagtatcgacaattagcaaaacttaattcaacg
tatgtgaaaggcttgttggaagttgtaaatcccgaagatagcaagatacatacccgctat
ttgcaaacgctaacacaaactgggcgactttcttcggttgacccgaatatgcagaatatt
ccggatcgcgatgaagaaggcaaacgaatccgaaaggcttttgttccaagtcatcaagga
tgggaaattttcggtgctgattattctcagattgaattgcgtgttttggctcacgtcact
ggggatgaaaacttaaaaaacgcttttgaatcaggagaggatattcatgcagccacggct
cgttcgatttttggtcttagtgctgatcaaaaaattactttcgatcagcgccgccgcgcc
aaggctgttaattttgggattgtttatggaatttccgattttggtttagctcaacgtctg
gggatttcaagaattgaagggaaagagattattcagacttattttcatgaatttccaaag
gttaaaacatggattgactcgattatcgctttagctcataagcaggggtacgttgaaaca
atttcccagcgtcgtcgttatttgcccgatattcatagcaaaaattttaatttaagatct
tttgcagaaaggaccgctactaatacaccaatccaaggttcagcggctgatatcatcaaa
attgccatgattaaaatgcagcgagcgctggacgacaaccacttgaaaacgaagatgctt
ttgcaggttcatgatgaattgattttcgaggctccgaatcaggaaatcgatactctggaa
gaacttgttccaaaagtaatggattcagccgttaaactagatgttcctttgcgtgttgaa
gcgcatcatggagttaattggtatgacgaaaaataa
DBGET
integrated database retrieval system