Oenococcus sp. UCMA 16435: DSM07_06840
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Entry
DSM07_06840 CDS
T05781
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
oen
Oenococcus sp. UCMA 16435
Pathway
oen00220
Arginine biosynthesis
oen00240
Pyrimidine metabolism
oen00250
Alanine, aspartate and glutamate metabolism
oen01100
Metabolic pathways
oen01110
Biosynthesis of secondary metabolites
oen01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
oen00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
DSM07_06840 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
DSM07_06840 (carB)
00220 Arginine biosynthesis
DSM07_06840 (carB)
Enzymes [BR:
oen01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
DSM07_06840 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
Dala_Dala_lig_C
MGS
ATP-grasp
ATP-grasp_3
ATPgrasp_Ter
GARS_A
RimK
ATP-grasp_4
ATP-grasp_5
ATP-grasp_2
Motif
Other DBs
NCBI-ProteinID:
AZZ61037
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Position
1375238..1378432
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AA seq
1064 aa
AA seq
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MPKRADIKKILVIGSGPIVIGQAAEFDYSGTQASLSLREEGYSVILVNSNPATIMTDTEI
ADQVYIEPLTLPFIKRIIRKERPQALLATIGGQTALNLAKELAEDGILEELKIELLGTKL
NAIEAAEDREKFKQLMETLKEPVPESRIARTLEQAVHFADQIGYPIIVRPAYTLGGTGGG
IVENQEQLTQVAKNGLELSPVTQVLIEESIAGYKEIEFEVMRDTNDNALIVASMENFDPV
GIHTGDSIVVSPVQTLSDREYQMLRDAALKIIRALKIEGGVNIQLALDPDSFRYYVIEVN
PRVSRSSALASKATGYPIAKMAAKIAVGLTLDEIVNPVTGTTKAEFEPTLDYIVVKIPRW
PFDKFTEADRELGTQMKATGEVMAIGRNFESALMKAVRSLEIGALALDEVTYSALSNQDL
LNRLMPATDERLFMIADLLRRGVTVKAIHKRSRIDKFFLDKILHLIEIEKELKMHVNDFK
ILKSAKENGFPDAAIARYWQLEEKELRHLRKKAGLSPVYKMVDTVAGEFASKTPYYYSTY
ETENESLKEKRPSVLVLGSGPIRIGQGVEFDYATVHCVKAIQKAGYKAIVINSNPETVST
DFSVSDKLYFEPLTLEDVLNVVDLEQPLGVVVQFGGQTAINLAGRLEDNGVNLLGTSLKD
INRSEDREDFNRVIKKLGLSQPFGKTATTVTQALSAAEEVGYPLLIRPSYVLGGRAMEIV
TNKQDLSGYMKRAVKVSLKHPVLIDSYLTGREAEIDLLSDGQTVVVPGIMEHIERAGVHS
GDSMSVYPAQYLSQEVQRQMLDAAFKLAKELHTIGLMNVQFVIHDQRAYVIEVNPRASRT
LPFISKATDLPLAQLATRVMLGEKLADLGFKSGLLAPKKLVYVKAPVFSFNKLPKVDSSL
GPEMKSTGEVMGVDQNLAKALYKAFVAAGFKIYEHGNVLFTIADRDKKEALDLARRFDQL
GYVLWATAGTGSFLREKHLPVRQLGKIAEGQLNPVTAMRQGKLQIVINRLKTDEALESDG
QAIRAAAIENGVPLFTSLDTVAAFLQVLESRSFNVSPIKKGDQS
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaaagagctgatattaaaaaaatactcgtgatcggttccgggccgatcgttatc
gggcaggccgccgagtttgattattcaggaacccaggccagcctgtctttaagagaagag
ggctattcggtaattctcgtcaactctaatccggcgacgatcatgaccgatacggagatt
gccgatcaggtctatatcgaaccgttgacactgccctttatcaagcggattatccgtaag
gaacgtccacaggccttgttagcgacaatcggcggtcagacggctttgaacctggctaaa
gaattggccgaggatgggatcttagaagaactgaaaatcgagttgttgggaaccaaacta
aacgcgatcgaagcagccgaagaccgggaaaagtttaaacagctgatggaaactttaaaa
gagccggttcccgaatccaggattgccaggacgcttgaacaggcggtgcattttgccgat
caaattggttacccgataatcgttcggccggcctataccttaggcggcacgggcggcggg
attgttgaaaatcaagaacaattaacacaagttgccaaaaacggtttggaactctcgccg
gttacccaggttctaattgaagagtcgattgccggttataaagaaatcgaatttgaagtc
atgcgcgatactaacgacaacgccctgatcgtcgcttcaatggaaaacttcgatccggtc
ggtatccataccggggactcgattgttgtctctccggttcagaccctctctgatcgggag
tatcaaatgcttagagacgccgctttgaaaattattcgtgccttaaaaattgaaggcggc
gtcaatatccagcttgccctggatcctgatagttttcgttattacgttatcgaagtcaac
ccgcgggtttccaggtcttcggctctggccagcaaggcgaccggatacccgatcgcgaaa
atggccgccaagatcgccgttggcctgactctagacgagattgtcaatcccgttaccggg
acaacaaaggctgagttcgaaccgacattggactacatcgtcgtaaaaattccccgctgg
ccctttgacaagtttaccgaggccgatcgagaactgggcacgcagatgaaagcgaccgga
gaagtaatggcgatcggcagaaatttcgaaagcgccctaatgaaggccgtccgttcttta
gagatcggtgctttggcccttgatgaggtgacttacagcgctttaagcaatcaagatttg
ctcaatcgattaatgccggcgaccgacgaacggctctttatgatcgccgatctcctaaga
agaggggtgacggttaaagcaattcacaagagaagccgaatcgacaaatttttcttggac
aaaattcttcatttgattgaaatcgaaaaagaattaaaaatgcatgttaatgatttcaag
atcctcaaaagcgccaaagaaaacggttttcccgatgccgcgattgcccgttattggcag
cttgaagaaaaagaactgcgtcatttaagaaagaaggcgggcttatctccggtttataag
atggtcgatacggtggccggcgaatttgcttcaaaaactccctactattattcaacctat
gaaacggaaaacgaatccttgaaagaaaagcggccgagtgttctggtactcggttccgga
ccgatcagaatcggtcagggcgtggaattcgattacgccacggtccattgcgtcaaggcg
attcaaaaagccggttacaaagcaattgtgattaattccaatccggaaactgtttcaacc
gatttttccgtttccgacaagctctacttcgaaccattgaccttagaagatgtcttaaac
gttgtcgatttagaacagccgctgggcgtcgtggtccagttcggcggacaaaccgcgatc
aatctggccgggcgtttggaagataacggcgtcaacttgttgggcaccagcttaaaggat
atcaaccgctccgaggatcgagaggacttcaaccgggtgattaaaaaactcggcctgtcc
cagccctttggaaaaaccgcgacgacggtcacccaggccctgtctgcagccgaagaggtc
ggctatccgcttttaatccggccttcttatgtcctgggcggtcgggcaatggaaatcgtg
acaaacaaacaagacctatccggctatatgaaaagagccgtgaaggtttctttaaagcac
ccggttttaatcgattcttatttaaccggtcgggaggcggaaatcgatctattaagcgac
gggcagacggttgtcgttcctggtatcatggagcacatcgaacgggccggagttcattcc
ggcgattcgatgtctgtttatccggctcagtacttaagccaggaagtacaaagacagatg
ctggatgcggcctttaaactagccaaggaactccatacgatcggtttgatgaatgttcaa
tttgtgattcacgatcaacgggcctatgtaatcgaagtcaatcccagggcctccagaacg
cttccctttatttccaaagcaaccgatctgcccctggcccaattagcgacgcgggtcatg
cttggcgaaaaattagccgacctgggttttaagagcggtttgttggcacccaaaaaactt
gtctatgtgaaggccccggtcttttcctttaacaaattgcctaaagtcgattcttctttg
ggaccggaaatgaaatcgaccggtgaagttatgggcgttgatcaaaacctggccaaggcc
ctctataaggcttttgtggcggccggttttaaaatctacgagcatggcaatgtcctcttt
acaattgccgatcgggataaaaaagaagcccttgacctggccagacgttttgatcaattg
ggctatgtcctttgggcaacggccggtaccggcagctttctgcgtgaaaagcatttaccg
gtcaggcagctgggaaagatagccgaaggccaactaaaccccgtcacagccatgcgtcag
ggcaaattgcaaattgtcattaaccgactaaaaaccgatgaagccttggagtccgatggc
caggccatcagggccgctgcgattgaaaacggcgttccgctctttacctcattggatacg
gtagcagcctttttgcaggttcttgaaagtagatccttcaatgtttcaccaattaagaaa
ggagatcaatcatga
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