Oenococcus sp. UCMA 16435: DSM07_07060
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Entry
DSM07_07060 CDS
T05781
Symbol
addA
Name
(GenBank) helicase-exonuclease AddAB subunit AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
oen
Oenococcus sp. UCMA 16435
Brite
KEGG Orthology (KO) [BR:
oen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oen03400
]
DSM07_07060 (addA)
Enzymes [BR:
oen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DSM07_07060 (addA)
DNA repair and recombination proteins [BR:
oen03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
DSM07_07060 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
AAA_12
ResIII
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AZZ61076
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All DBs
Position
1426025..1429585
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AA seq
1186 aa
AA seq
DB search
MNFSKNQQAVISHIPDHNLLVAASAGSGKTTVLIEHVYQQLVSGKNIDRFLISTFTDAAA
LEMKNRLEKRIRTGIAEEDGRLKKHLQEQLLLLNSAAIGTLDSFSLRIIERYYSVIGLDP
RYRMLADQTEKNLLVKDVLDDTFDEVYHDENFLRLLNNFSSASHDQDLKNLVIKLNTMAE
TRADPDLWLDSIAENYRLNAGLTEGSFWQQLLEPQIINRTSAALYELLSAKKGVENLEDY
HSYIAYLTDTISLVQGFIEVCSQKNWQQMSDYFVNNSWPRSARKSGKNEEEANYFSNWIK
PWIDEAKDSYRSIESDFLFLNESQWLDVSKQSLGIVEELIRLTKVFRKKFAFKKRELSLL
DFSDGEQFAYQILQKQSVRKEIQSLFDEVLVDEYQDINDLQENILTDVSNGSNFFMVGDL
KQSIYGFRQADPDNFSNKYIEYKKRNGGELIELSENYRSQHNVADFTNTVFRKLMDRRLG
GIDYRGDVELKAANRDYPKNLKSVADISIFDIDKENSDDEDFNTREAEIKIIAAKIQKLV
GQAEIYDRQSGKMRPVVYRDITILERSHSWENDIQTIFQKYHIPINVAAGNFLQEFEVSI
VLSFLKIIDNPHQDIPLVAVLRSPIYGLDENQLAEIRIVDMKHDYFSAVQAYVKTGQDSD
LQKKLADFLIQLSNYRKLAADNQIVDLIWQIYNDTNWPEYVAGMVGGSQRQANLHALYQY
AQQLSDNHFVGLFSFIRYVEQLMDSVEDFAQAPVDMGQEAVSVMTIHAAKGLEFPIVFLL
NLDKQIDNRDSNGSMVVDFDNGIGIDFIHPVSQVKIPTIQKIAVAEKIKEKNWAEEMRLL
YVALTRSEQRLYLVGSSKKMSALIHNWGTPVSTGKNVIAFQDRMRAKSYQSWIGMSLANS
GYIQLEKVEGEYSKKDLTFKIKAYNAQTIPEIIGNKTVVGQGEQKETRIDLFQSKKILDY
KYPYKLESELPAYHNVSELKRIFEDPDALLMPEMDSNRQPEITDLPQPAFINKGNQEQAS
STDKGTATHLILEKIDWKKKIDKKYLQQLLKENVSDQKIRQSIELDQIIWFVNSEFGEEI
KRRESTLKREQTFAMLISAKQIYRQAKTTDPVLVHGIIDGYFINRDLITLFDYKTDRLSK
DYVSKLKERYSGQLNLYAAALSSIYPNLKVARKVIVGLQGKSLIYL
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
atgaatttttctaaaaatcagcaggccgttatctcacatattcctgatcataatttgttg
gtagccgcctcagccggttccggcaaaacaactgtattgattgaacatgtttatcagcag
ttggtctctggaaaaaatatagatcgttttttaatttcaacttttaccgatgcagcagct
ttggaaatgaagaatcgtttggaaaaacggattcgaaccggtattgctgaagaagacggt
cgactaaaaaaacatttgcaagaacaactgctgctgctgaattcagctgcaattggtact
ttggattctttttctttaaggattattgaacgttattactcggtaatcgggcttgatccg
cgatatcgtatgttggccgaccaaaccgaaaaaaatcttctcgtcaaggatgttttggat
gatacctttgatgaggtatatcatgatgaaaattttctaaggctcttgaacaatttttct
tccgccagtcatgatcaggatttgaaaaatttggtcatcaaactgaatacgatggctgaa
acgcgtgccgatcccgatctttggcttgattcgattgctgaaaattatcgtttgaacgct
ggccttacagaaggatctttttggcagcaattattggaaccgcaaatcatcaatcgtact
tcggcggctctttatgagttgctttctgctaaaaaaggagttgaaaatctcgaagattat
catagttatatagcttatttaactgatacgattagtttggttcagggttttatcgaagtt
tgttctcaaaaaaattggcagcaaatgagcgattattttgttaataattcttggccaaga
tccgcccgcaaatctggaaaaaacgaggaagaagccaattattttagtaattggatcaag
ccttggatcgatgaagccaaggattcctatcgttcgattgaaagtgattttttattttta
aacgaatcccagtggcttgatgttagtaaacaatctttaggaatcgttgaagagttgatt
cgattaacaaaggtttttcgaaaaaaatttgcttttaaaaaaagagaattatcattgctt
gatttttccgacggcgaacagtttgcttatcaaattcttcaaaaacaatcggttcgtaaa
gagattcaatcgctttttgatgaagtgcttgttgacgagtatcaggatattaacgatctc
caagaaaatattctcacggacgtttccaatggatcgaatttctttatggttggtgattta
aaacaaagtatctacggttttcgacaggcagatccggataatttttcaaataaatatatt
gaatacaaaaaaagaaatggtggcgaattgatagaactgtctgaaaattatcgttcccaa
cataacgttgctgattttacgaatactgtttttcgtaaattgatggatcgtagacttggt
ggaatcgattatcggggagatgttgaattaaaagcagctaatcgagattacccgaagaat
ttgaagagtgtcgctgatatctcgatttttgatattgacaaggaaaacagcgatgacgaa
gatttcaatactcgtgaagcggaaattaaaattattgctgcaaaaattcagaaactggtt
ggacaggctgaaatttatgatcgccaaagcggaaaaatgcggccggttgtttatcgagat
attactattcttgaacgttcccacagttgggaaaatgatatccagacaattttccaaaaa
tatcatattccaattaatgttgcggctggtaattttttgcaggagtttgaagtatcaatt
gttttgagttttttaaagattatcgataatcctcaccaagatattcctttagtagctgtt
ttgcgatctccgatttacgggttggatgagaaccaattggcagagatcagaatcgtcgac
atgaaacatgactatttttcggccgttcaagcttatgtcaaaacaggccaggattcggat
ttgcaaaaaaaattagcagattttttgattcaattatcgaactaccgaaaactagctgct
gacaatcaaatcgttgatttaatttggcaaatttataatgataccaactggccggaatat
gttgctggaatggtcggcggcagccaaagacaggctaatttacatgctctataccaatat
gctcagcagctttccgataatcattttgttggtttattttcttttatccgctatgttgaa
cagttgatggactcggtggaggattttgcccaggctccagttgatatgggccaggaagct
gtatcggtaatgacgattcatgcggcaaaaggactggagtttccgattgtttttctttta
aatttggataagcaaattgataatcgtgattccaatggttcaatggttgttgactttgat
aatggtattggaattgattttattcacccggtttcccaggtaaaaatcccgacaattcaa
aaaattgccgttgccgagaaaattaaagaaaaaaattgggctgaagaaatgaggctctta
tacgttgctttgacaagatctgaacagagattgtatttagttggttcaagtaaaaaaatg
agcgctttaattcataattggggaacacctgtttcgactggaaaaaacgtaattgctttt
caagatcgaatgcgggcgaaaagttaccaaagctggattggcatgtctttagcaaacagt
ggctatattcaactggagaaagttgaaggagaatattctaaaaaagatcttacttttaaa
attaaagcttacaatgcgcagacgattccggaaattattggaaataaaacagtagtcggg
caaggagaacaaaaggagaccagaattgatctttttcaaagcaaaaaaattcttgattat
aagtatccttataaacttgaaagcgagttgccggcttatcataacgttagtgaattgaaa
cgtatttttgaagatcccgatgcactattgatgccggaaatggattcgaatcgtcagccg
gaaattaccgatcttcctcaaccggcgtttatcaacaaaggcaatcaagagcaggctagt
tctactgataaaggaactgccacacatttgattttggaaaaaatagactggaaaaagaaa
attgataaaaaatatcttcaacagttactaaaagagaatgtttccgatcaaaaaattcgg
caatcgattgaacttgatcagattatctggtttgtcaattctgagtttggcgaagaaata
aaaagacgtgaatctactttaaagcgtgaacaaacctttgcaatgctgatttcggcaaaa
cagatttatcgacaagccaaaacaactgacccggttttggttcacggaattattgatggc
tattttatcaatcgtgatctgattactttgtttgactataaaacagaccgtttaagcaag
gattatgtttccaaattaaaggagcgctactctggtcaacttaatctatacgctgcggcc
ttatccagtatctatccgaatttaaaagtcgcaagaaaagtaattgtcggtttgcagggc
aaaagcttgatatatttataa
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