Oenococcus sp. UCMA 16435: DSM07_07105
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Entry
DSM07_07105 CDS
T05781
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
oen
Oenococcus sp. UCMA 16435
Brite
KEGG Orthology (KO) [BR:
oen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oen03400
]
DSM07_07105 (radA)
DNA repair and recombination proteins [BR:
oen03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
DSM07_07105 (radA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
DnaB_C
ChlI
DUF7125
Lon_C
RecA_N
ABC_tran
nSTAND_NTPase5
AAA_16
AAA_22
AAA_14
SLFN-g3_helicase
GvpD_P-loop
AAA_24
nSTAND3
NTPase_1
Rad51
ATPase_2
NPHP3_N
AAA_18
NACHT
AAA
divDNAB
AAA_30
KTI12
RUBY_RBDX
CbiA
DUF7129
KdpD
HypA
DUF5906
Motif
Other DBs
NCBI-ProteinID:
AZZ61085
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Position
1434174..1435586
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AA seq
470 aa
AA seq
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MAKAKTQFVCSNCGYTSARYLGRCPNCGQWNTLIEEKIVPETVVNRKARISFDGRVAKPK
KISEISGNELPRTRTGLRELNRVLGGGIVPGSLILIGGDPGIGKSTLMLQVSGQLAEHGG
SVLYVSGEESDNQIKLRADRLGVGSDSFIVYPETDMEQIKSIVQQIEPDYLVIDSVQTMQ
EPDLQSPIGSVAQIREVTADLMQIAKTNAITVFIVGHVTKDGSIAGPKILEHMVDTVLYF
EGDANYKYRILRTVKNRFGSTNELGIFEMRDHGLREVANPSEIFLEERLAGATGSAITAS
MEGSRPILVEVQALVAPTVFGNAQRVTTGVDRNRVAQILAVLEKHANLLLQNQDAHVRIT
GGVKIDEPAADLAIALAVASSYHEKATNASDVFLGEVGLGGEVRSISLIEDRLKEIAKLG
FKRVIVSKNNLSGIDLPKDLQVIGVSTLEEALKLGLDLNKASKQKGFADL
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagcaaaaacacaatttgtttgttccaactgtggctataccagcgcgcgttat
cttggacgctgcccgaattgtggccagtggaatacattaatagaagaaaaaattgttcct
gaaacagttgtaaatcgtaaagctcgaatcagttttgatgggcgggttgccaaaccgaaa
aagatttctgaaatctcaggtaatgaactacccagaacaaggaccggcttaagggaatta
aatcgtgttcttggcggtggaatcgtcccgggaagcttaattttgattggcggtgatcca
ggaattggaaaatcgactttaatgcttcaggtttccggtcaattggctgaacacggagga
agcgttctttatgtttccggcgaagagtccgataatcaaattaaattgcgcgctgatcga
cttggggttggttccgattcttttattgtttatccggaaacggatatggaacaaattaaa
tcgattgtccaacaaatcgaaccggattatttggtaatcgattcggttcagacgatgcag
gaaccagatctgcagtcgccaattggttcggttgctcaaatacgagaagtgacggccgac
ttaatgcagatcgccaaaacgaatgcgattacggttttcattgttggacacgttactaag
gatgggtcgatcgccggtccgaaaattctcgagcacatggttgatacggttctgtatttt
gaaggggatgccaattataagtatcgaattctgcgcactgttaagaatcgttttggttca
acgaatgagcttggtatttttgagatgcgtgaccatggtttaagagaggttgccaaccca
tcggaaatatttcttgaggagcgtttggccggagcaaccggatcggcaattacggcaagc
atggaaggcagccgcccgattctagtcgaggtacaggctttggttgcgccaacagttttt
ggtaacgctcagcgtgttacgaccggtgttgaccggaaccgtgttgcccagattctggct
gttttggaaaaacatgccaacctgcttttacaaaatcaggatgcccacgttcgcattacc
ggtggtgttaaaattgacgaaccagctgctgatttggcgattgctttagctgttgccagt
tcctatcatgaaaaagcaaccaatgcctctgatgtttttcttggcgaagtaggtttagga
ggcgaagttcgttcaatttctttaattgaagatcgtttaaaagaaattgccaaacttgga
tttaaacgagtaattgtttcaaagaacaatctatcaggaattgatttgccaaaagatctc
caggtaatcggcgtttctactttggaggaagcgctaaaattagggcttgatttgaataaa
gcttccaaacaaaaaggttttgctgatttatga
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