Oenococcus sp. UCMA 16435: DSM07_07635
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Entry
DSM07_07635 CDS
T05781
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
oen
Oenococcus sp. UCMA 16435
Pathway
oen03420
Nucleotide excision repair
oen03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
oen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DSM07_07635 (pcrA)
03430 Mismatch repair
DSM07_07635 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oen03400
]
DSM07_07635 (pcrA)
Enzymes [BR:
oen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DSM07_07635 (pcrA)
DNA repair and recombination proteins [BR:
oen03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DSM07_07635 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
DSM07_07635 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
AAA_12
ResIII
CarD_TRCF_RID
Motif
Other DBs
NCBI-ProteinID:
AZZ61173
LinkDB
All DBs
Position
1541949..1544207
Genome browser
AA seq
752 aa
AA seq
DB search
MNDLLTGLNDKQKEAVLTTEGPLLIMAGAGSGKTRVLTHRVAYLVKEKHVDPWSILAITF
TNKAAREMKERIADLVDEEDARSIWVSTFHALSARILRRDVDKIGFTTSFSILDSSGQKT
LMKHVLNDLNYDSNQYDPKSILASISNFKNTLQTPNDAKAAAKTPFDEAVSESYDLYERR
LTQSQSMDFDDLIMRTIQLFKQAPDVLHYYQHKFKYIHVDEYQDTNGAQYKLVEMLAAGD
FGSRNLAVVGDSDQSIYGWRGADMNNILNFEKDFPGAKTVLLEQNYRSTKHILMAANQVI
QNNIERKPKNLWTNNQDGNLIHYYRAQSESDEAHYVLTKIQDGVKKGRSLNDFAILFRTN
AQSRVFEQVFNSNKIQYTMVGGTRFFERKEIQDIVAYLQLTANLDNDTAFERIVNEPKRS
IGSSSIEKLRSFATKKDLSLMKSIAVLDDDSRLSKKAQSNFHKFSQMVQFFSDQSHFLSL
TELTNEIFNQTGIREQYVEKDDLESQSRVENLDEFLSQTKQFDQDYDEEASETNNPLVDF
LGQTALVSDLDSYDESAGQVTLMTVHAAKGLEFPVVFIVGLEEGIFPSARAMMERDGLEE
ERRLAYVAITRAQEELYLTNAFGRLLYGRAQSNEPSMFLDEIDDSLLDKENSSSNRTQTS
SESFDSYDRPMPFDRKSELSSRKYDQAFAKTYHGNGAEKKDWQLGDQVKHKTFGIGRIVA
IDNEGSDKLLKIAFASKGIKQLMASFAPIEKI
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
gtgaatgatttattaacaggtttaaatgataagcaaaaagaagcagtccttactaccgaa
ggaccgctattaattatggctggagccggttctggcaagacgcgtgttctaactcaccgg
gtcgcctatttagtcaaagagaagcatgttgatccctggtcgattttagcgattactttt
acaaataaagcagctcgcgaaatgaaagaacgaatcgctgatttagttgacgaagaagat
gctcgatctatttgggtgtcgacttttcatgctctgtcggcgagaatcctacgacgggat
gttgataaaattggttttacgaccagcttttcgatcctcgactcaagtggccagaagact
ttaatgaagcatgtgctaaacgatttgaattacgattcaaatcaatatgatccgaagtcg
attctagcctctatctctaattttaaaaacacacttcagacacccaatgatgcaaaagca
gcagctaagacgccttttgatgaagcggtttctgaatcttacgatctttatgaacggcgg
ttgactcaatcacaatctatggattttgacgatttgattatgcggacgattcagcttttc
aaacaagcaccggatgttctccattattaccaacacaagtttaaatatattcatgtcgat
gaatatcaggacacaaacggtgctcaatacaaacttgttgaaatgttggcggccggtgat
ttcgggtctcgtaatttagctgttgttggggattctgatcagagtatttatggttggcgc
ggagccgatatgaataatattcttaattttgagaaggattttcccggtgctaaaacggtt
ttgttagaacagaattatcgttcgacaaagcatattttaatggccgctaatcaggttatt
caaaataatatcgaacgtaagccaaagaacctttggactaataatcaagatggaaatttg
attcattactaccgtgctcaatccgaatccgacgaggctcattatgtattaacgaaaatt
caggatggcgttaaaaaaggacgcagcctaaatgattttgcaattttgttccgcacaaac
gcacaatcgcgtgttttcgaacaagtttttaattcaaataagattcaatatacaatggtt
ggcgggacgcgtttctttgagagaaaagaaattcaagacattgttgcttatttgcaactg
acggcaaatcttgataatgacaccgcttttgaacggattgttaatgagccaaaacgttca
attggaagcagctcaattgaaaaactgcgttcttttgcaactaaaaaagatctttctttg
atgaaatcgattgctgttttggatgatgacagtcgtctttcaaaaaaagctcagagcaac
tttcacaagttttcccaaatggttcaatttttttccgatcaatcgcattttctttctttg
actgaattgacaaacgaaatctttaatcaaaccggaatccgtgagcaatatgttgaaaaa
gatgatttagagtctcagtcaagagttgagaaccttgacgaatttctgtcacaaacgaaa
caattcgatcaggattatgacgaagaggcttctgaaacgaacaaccccttagttgatttt
cttggtcaaacggctttggttagtgacttggattcttatgatgaaagtgccgggcaggtt
actttgatgacagttcatgctgctaaaggtctggagttcccagttgtctttattgttggg
cttgaagagggaattttcccatcagctcgtgcgatgatggaacgcgacggtttggaagag
gaacgccggcttgcctatgtagctattactcgtgcacaggaagaattatacttaacgaat
gcttttgggcgtttattgtatgggcgggcccaatcaaacgaaccatcgatgtttcttgat
gaaatcgatgattcgttgcttgacaaagaaaattcttcttccaatcgaactcagacttcg
tcagaatcttttgacagttatgatcggccaatgccatttgatcgcaagtccgagctatcg
agccgtaaatatgatcaggccttcgctaaaacttatcatggcaatggagccgaaaaaaaa
gattggcagctaggagatcaagttaaacataaaacttttggtattggaagaattgttgcg
attgataacgagggtagcgataaacttttaaaaattgcttttgcctcgaaaggaattaag
caattaatggcatcttttgccccgattgagaaaatataa
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