Oenococcus sp. UCMA 16435: DSM07_08795
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Entry
DSM07_08795 CDS
T05781
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
oen
Oenococcus sp. UCMA 16435
Pathway
oen03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
oen00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DSM07_08795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oen03021
]
DSM07_08795
03400 DNA repair and recombination proteins [BR:
oen03400
]
DSM07_08795
Enzymes [BR:
oen01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DSM07_08795
Transcription machinery [BR:
oen03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
DSM07_08795
DNA repair and recombination proteins [BR:
oen03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
DSM07_08795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AZZ61371
LinkDB
All DBs
Position
1757540..1758484
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AA seq
314 aa
AA seq
DB search
MIEFQKPTISTVEESENYGKFVAEPLERGYGTTLGNSLRRVLLSSLPGAAINSVQIDGVL
HEFTTIDGVTEDVTQIILNLKKVAMRIDSDEQKTLEVDFSGAGELTAGDIKSDGDVEILN
PDLHIATVSAGKSLHMALTAIRGRGYDSAEENKAKMELGIGVLAIDSIYTPISKVNYTVE
KTRVGHRDDYDKLTLEVWTDGSVSPSESLSLGSKILSEHLALFVDLSNAGKKEMMLDPDA
VETVMEKKEPIEELELSVRSFNCLKRAGINTIEDLTDKTLHDMGEVRNLGRKSLEEIIQK
LAERGHSFKQDTEN
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaatttcaaaagccaacaatttcgaccgtcgaggaatcagaaaattatggaaag
tttgttgccgagcctctcgagcgcggttatggaactactcttggaaattcattaagaaga
gttttgttgtccagcctgcccggtgcagcaattaattctgtccagattgatggtgtcctt
catgaattcacgactattgatggtgtaacagaagatgttacacaaattattttgaatttg
aaaaaggttgctatgcggattgattctgacgaacagaagacgcttgaagttgactttagc
ggtgctggtgaattgactgcgggagatattaaaagcgatggtgacgttgagattttgaat
cctgatttgcacatcgcaactgtatcggctggtaagagtctacatatggctcttacggca
atacgtggtcgtggatatgattcagctgaagagaataaagccaaaatggaacttggtatt
ggcgttcttgcaattgattcaatttacacacctatttctaaagtcaattatacggttgag
aaaactcgtgttggtcatcgtgacgattacgataaattaactttggaagtatggactgat
ggatctgttagtccgagtgagtccttgagtcttggatctaaaatattatctgaacatcta
gctttattcgttgatttgagtaatgctggaaagaaagaaatgatgcttgatcctgatgct
gttgaaactgttatggaaaagaaagaaccgattgaagaacttgagctttcggttcgctca
ttcaattgtttaaaacgtgcaggaattaatacaattgaggatctaacggataaaactttg
catgatatgggtgaagttagaaatcttggccgcaaatctctcgaagaaattattcagaaa
ttagctgagcgtggtcattcattcaagcaagatactgaaaactaa
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