Oenococcus sp. UCMA 16435: DSM07_09295
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Entry
DSM07_09295 CDS
T05781
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
oen
Oenococcus sp. UCMA 16435
Brite
KEGG Orthology (KO) [BR:
oen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oen03016
]
DSM07_09295 (truB)
Enzymes [BR:
oen01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
DSM07_09295 (truB)
Transfer RNA biogenesis [BR:
oen03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DSM07_09295 (truB)
Prokaryotic type
DSM07_09295 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AZZ61456
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All DBs
Position
1863504..1864400
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AA seq
298 aa
AA seq
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MYNGIVLVDKPAGLTSFDVVAKLRKVFQQKQIGHTGTLDPSVTGLLVIVLGKATKLIDYL
QENQKQYRGTLILGLKTDTQDMDGQVIEIRALKEAIADIKKKTAFDSFLGISEQIPPMYS
AVKVGGKHLYELARKGETVERKARKIEVTEFCQVGGSKFDINKGQEYINFVATVSKGTYI
RTLIEDFGSKLGLPATMLKLRRIEADSYHVKNANNLEEILASKEPNQFIVPMEKLLPTLP
KYSINSDDWQLAKNGGWLKGLPISVSPIKIFYNNSFQAIYENHDGLYKPRKMLIHEDN
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgtataacggaattgttttggttgataaaccagcaggattgaccagttttgatgtggtt
gctaaattaagaaaagtgtttcaacaaaagcaaatcggacacactgggactctagacccg
tccgtaactggtttacttgtaattgttcttggcaaagcaacaaaattaattgattatctt
caggaaaatcagaaacaatatcgtggcactttgattctcggattaaaaaccgatactcag
gatatggacggccaagttattgagatacgcgctttgaaagaagcaattgccgatattaaa
aaaaagactgcttttgatagttttcttggaatttccgagcaaattccgccgatgtattct
gctgttaaagtaggtggaaaacatttatacgaactggctcggaagggcgaaactgtcgaa
agaaaagctagaaaaattgaagtgacagaattttgtcaggtaggcggatcaaaattcgat
attaataaaggtcaggaatatattaattttgttgcaactgtctcgaaagggacttacata
cgaactttaattgaagattttggttcaaaattgggtcttcctgcgacgatgctgaaatta
aggcgaattgaagctgacagctatcacgttaaaaatgcaaataatttagaggaaatattg
gctagtaaggaaccgaaccaatttattgttccaatggagaagctcctgccaacattacca
aaatattcaattaatagcgacgattggcaactggctaaaaacggtggttggttaaaggga
ctgccaatttccgtttcaccgattaaaattttttacaacaatagtttccaggctatttat
gaaaatcatgatggactttataagccaagaaagatgttgattcatgaagataattaa
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